Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.47■□□□□ 0.23
NPAS2Q99743 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 AC007967.3-201ENST00000434308 558 ntBASIC16.47■□□□□ 0.23
NPAS2Q99743 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
NPAS2Q99743 FGFR3P6-201ENST00000457012 610 ntBASIC16.47■□□□□ 0.23
NPAS2Q99743 RNA5SP419-201ENST00000515908 135 ntBASIC16.47■□□□□ 0.23
NPAS2Q99743 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.47■□□□□ 0.23
NPAS2Q99743 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.47■□□□□ 0.23
NPAS2Q99743 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.47■□□□□ 0.23
NPAS2Q99743 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.47■□□□□ 0.23
NPAS2Q99743 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.47■□□□□ 0.23
NPAS2Q99743 AL355877.3-201ENST00000622820 899 ntBASIC16.47■□□□□ 0.23
NPAS2Q99743 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NPAS2Q99743 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NPAS2Q99743 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.47■□□□□ 0.23
NPAS2Q99743 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 HLA-A-201ENST00000376802 1334 ntBASIC16.46■□□□□ 0.23
NPAS2Q99743 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
NPAS2Q99743 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NPAS2Q99743 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.46■□□□□ 0.23
NPAS2Q99743 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 AC024909.3-201ENST00000611513 2257 ntBASIC16.46■□□□□ 0.23
NPAS2Q99743 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.46■□□□□ 0.23
NPAS2Q99743 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.46■□□□□ 0.23
NPAS2Q99743 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.46■□□□□ 0.23
NPAS2Q99743 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NPAS2Q99743 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.46■□□□□ 0.23
NPAS2Q99743 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.46■□□□□ 0.23
NPAS2Q99743 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 AC148477.8-201ENST00000624298 468 ntBASIC16.46■□□□□ 0.23
NPAS2Q99743 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.46■□□□□ 0.23
NPAS2Q99743 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.46■□□□□ 0.23
NPAS2Q99743 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NPAS2Q99743 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS2Q99743 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPAS2Q99743 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NPAS2Q99743 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS2Q99743 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.45■□□□□ 0.22
NPAS2Q99743 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NPAS2Q99743 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.45■□□□□ 0.22
NPAS2Q99743 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
NPAS2Q99743 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS2Q99743 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS2Q99743 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.45■□□□□ 0.22
NPAS2Q99743 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS2Q99743 FAM197Y8-203ENST00000450145 560 ntBASIC16.45■□□□□ 0.22
NPAS2Q99743 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.45■□□□□ 0.22
NPAS2Q99743 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NPAS2Q99743 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.45■□□□□ 0.22
NPAS2Q99743 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NPAS2Q99743 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.45■□□□□ 0.22
NPAS2Q99743 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS2Q99743 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.45■□□□□ 0.22
NPAS2Q99743 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NPAS2Q99743 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
NPAS2Q99743 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS2Q99743 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS2Q99743 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
NPAS2Q99743 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS2Q99743 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS2Q99743 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS2Q99743 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms