Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
PHOX2BQ99453 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.94■□□□□ 0.3
PHOX2BQ99453 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PHOX2BQ99453 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.94■□□□□ 0.3
PHOX2BQ99453 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHOX2BQ99453 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHOX2BQ99453 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHOX2BQ99453 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHOX2BQ99453 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHOX2BQ99453 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHOX2BQ99453 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHOX2BQ99453 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHOX2BQ99453 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHOX2BQ99453 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHOX2BQ99453 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
PHOX2BQ99453 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.94■□□□□ 0.3
PHOX2BQ99453 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.94■□□□□ 0.3
PHOX2BQ99453 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHOX2BQ99453 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.94■□□□□ 0.3
PHOX2BQ99453 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHOX2BQ99453 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 AC100803.2-201ENST00000562459 1963 ntBASIC16.93■□□□□ 0.3
PHOX2BQ99453 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 CROCCP4-201ENST00000457096 498 ntBASIC16.93■□□□□ 0.3
PHOX2BQ99453 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 AC009336.1-201ENST00000608941 1553 ntBASIC16.93■□□□□ 0.3
PHOX2BQ99453 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHOX2BQ99453 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.93■□□□□ 0.3
PHOX2BQ99453 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 AC073592.3-201ENST00000625118 1834 ntBASIC16.92■□□□□ 0.3
PHOX2BQ99453 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.92■□□□□ 0.3
PHOX2BQ99453 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 AC010326.4-201ENST00000604665 891 ntBASIC16.92■□□□□ 0.3
PHOX2BQ99453 AL139099.5-201ENST00000635274 300 ntBASIC16.92■□□□□ 0.3
PHOX2BQ99453 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PHOX2BQ99453 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHOX2BQ99453 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms