Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.9□□□□□ -0.02
SPENQ96T58 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.9□□□□□ -0.02
SPENQ96T58 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SPENQ96T58 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SPENQ96T58 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SPENQ96T58 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.9□□□□□ -0.02
SPENQ96T58 BCYRN1-201ENST00000418539 200 ntBASIC14.9□□□□□ -0.02
SPENQ96T58 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.9□□□□□ -0.02
SPENQ96T58 DOC2GP-202ENST00000514950 1163 ntBASIC14.9□□□□□ -0.02
SPENQ96T58 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.9□□□□□ -0.02
SPENQ96T58 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 AL512361.1-201ENST00000554200 418 ntBASIC14.9□□□□□ -0.02
SPENQ96T58 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SPENQ96T58 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SPENQ96T58 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.9□□□□□ -0.02
SPENQ96T58 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.9□□□□□ -0.02
SPENQ96T58 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.9□□□□□ -0.02
SPENQ96T58 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SPENQ96T58 MPDU1-223ENST00000582151 728 ntBASIC14.9□□□□□ -0.02
SPENQ96T58 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.9□□□□□ -0.02
SPENQ96T58 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SPENQ96T58 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.9□□□□□ -0.02
SPENQ96T58 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.9□□□□□ -0.02
SPENQ96T58 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.9□□□□□ -0.02
SPENQ96T58 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SPENQ96T58 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.9□□□□□ -0.02
SPENQ96T58 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SPENQ96T58 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.89□□□□□ -0.03
SPENQ96T58 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.89□□□□□ -0.03
SPENQ96T58 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.89□□□□□ -0.03
SPENQ96T58 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SPENQ96T58 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.89□□□□□ -0.03
SPENQ96T58 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SPENQ96T58 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.89□□□□□ -0.03
SPENQ96T58 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
SPENQ96T58 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.89□□□□□ -0.03
SPENQ96T58 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
SPENQ96T58 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.89□□□□□ -0.03
SPENQ96T58 AL512343.1-201ENST00000605837 169 ntBASIC14.89□□□□□ -0.03
SPENQ96T58 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
SPENQ96T58 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 GGT4P-201ENST00000623672 1708 ntBASIC14.89□□□□□ -0.03
SPENQ96T58 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.89□□□□□ -0.03
SPENQ96T58 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SPENQ96T58 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.89□□□□□ -0.03
SPENQ96T58 AL079307.3-201ENST00000556114 283 ntBASIC14.89□□□□□ -0.03
SPENQ96T58 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.89□□□□□ -0.03
SPENQ96T58 AL391069.4-201ENST00000609583 481 ntBASIC14.89□□□□□ -0.03
SPENQ96T58 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 AC008764.6-201ENST00000595909 2069 ntBASIC14.89□□□□□ -0.03
SPENQ96T58 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SPENQ96T58 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.89□□□□□ -0.03
SPENQ96T58 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
SPENQ96T58 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPENQ96T58 SNX33P1-201ENST00000592116 1762 ntBASIC14.89□□□□□ -0.03
SPENQ96T58 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPENQ96T58 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SPENQ96T58 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.88□□□□□ -0.03
SPENQ96T58 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.88□□□□□ -0.03
SPENQ96T58 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPENQ96T58 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.88□□□□□ -0.03
SPENQ96T58 AC105021.1-202ENST00000570572 669 ntBASIC14.88□□□□□ -0.03
SPENQ96T58 AC061975.2-201ENST00000581722 295 ntBASIC14.88□□□□□ -0.03
SPENQ96T58 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.88□□□□□ -0.03
SPENQ96T58 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SPENQ96T58 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SPENQ96T58 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPENQ96T58 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SPENQ96T58 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.88□□□□□ -0.03
SPENQ96T58 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPENQ96T58 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.88□□□□□ -0.03
SPENQ96T58 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.88□□□□□ -0.03
SPENQ96T58 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.88□□□□□ -0.03
SPENQ96T58 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.88□□□□□ -0.03
SPENQ96T58 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.88□□□□□ -0.03
SPENQ96T58 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.88□□□□□ -0.03
SPENQ96T58 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPENQ96T58 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.88□□□□□ -0.03
SPENQ96T58 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms