Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.83■□□□□ 0.77
NEK1Q96PY6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEK1Q96PY6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEK1Q96PY6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEK1Q96PY6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NEK1Q96PY6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEK1Q96PY6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEK1Q96PY6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEK1Q96PY6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NEK1Q96PY6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NEK1Q96PY6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
NEK1Q96PY6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEK1Q96PY6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.82■□□□□ 0.76
NEK1Q96PY6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 MIR4515-201ENST00000584082 81 ntBASIC19.82■□□□□ 0.76
NEK1Q96PY6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 GGT4P-201ENST00000623672 1708 ntBASIC19.82■□□□□ 0.76
NEK1Q96PY6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEK1Q96PY6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.82■□□□□ 0.76
NEK1Q96PY6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.81■□□□□ 0.76
NEK1Q96PY6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 GGT3P-204ENST00000453783 1664 ntBASIC19.81■□□□□ 0.76
NEK1Q96PY6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NEK1Q96PY6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 ME2P1-201ENST00000426028 1970 ntBASIC19.81■□□□□ 0.76
NEK1Q96PY6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.81■□□□□ 0.76
NEK1Q96PY6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.81■□□□□ 0.76
NEK1Q96PY6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 AC006449.5-201ENST00000610658 2098 ntBASIC19.81■□□□□ 0.76
NEK1Q96PY6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.81■□□□□ 0.76
NEK1Q96PY6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.81■□□□□ 0.76
NEK1Q96PY6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.81■□□□□ 0.76
NEK1Q96PY6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.81■□□□□ 0.76
NEK1Q96PY6 AC145285.3-201ENST00000564603 959 ntBASIC19.81■□□□□ 0.76
NEK1Q96PY6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
NEK1Q96PY6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
NEK1Q96PY6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.81■□□□□ 0.76
NEK1Q96PY6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NEK1Q96PY6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 AC005052.1-201ENST00000625181 2492 ntBASIC19.81■□□□□ 0.76
NEK1Q96PY6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NEK1Q96PY6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEK1Q96PY6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.8■□□□□ 0.76
NEK1Q96PY6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.8■□□□□ 0.76
NEK1Q96PY6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.8■□□□□ 0.76
NEK1Q96PY6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.8■□□□□ 0.76
NEK1Q96PY6 AC104109.2-201ENST00000602919 1418 ntBASIC19.8■□□□□ 0.76
NEK1Q96PY6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.8■□□□□ 0.76
NEK1Q96PY6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NEK1Q96PY6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NEK1Q96PY6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.8■□□□□ 0.76
NEK1Q96PY6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms