Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.02■□□□□ 0.48
SNX27Q96L92 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX27Q96L92 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNX27Q96L92 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SNX27Q96L92 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.02■□□□□ 0.48
SNX27Q96L92 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.02■□□□□ 0.48
SNX27Q96L92 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.02■□□□□ 0.48
SNX27Q96L92 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SNX27Q96L92 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SNX27Q96L92 AC093028.1-201ENST00000622998 982 ntBASIC18.02■□□□□ 0.48
SNX27Q96L92 AC005915.1-201ENST00000624912 2018 ntBASIC18.02■□□□□ 0.48
SNX27Q96L92 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNX27Q96L92 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.02■□□□□ 0.48
SNX27Q96L92 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.02■□□□□ 0.47
SNX27Q96L92 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
SNX27Q96L92 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SNX27Q96L92 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX27Q96L92 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.02■□□□□ 0.47
SNX27Q96L92 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX27Q96L92 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SNX27Q96L92 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX27Q96L92 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SNX27Q96L92 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.01■□□□□ 0.47
SNX27Q96L92 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX27Q96L92 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX27Q96L92 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX27Q96L92 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SNX27Q96L92 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX27Q96L92 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
SNX27Q96L92 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX27Q96L92 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SNX27Q96L92 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.01■□□□□ 0.47
SNX27Q96L92 FAM58DP-201ENST00000428076 619 ntBASIC18.01■□□□□ 0.47
SNX27Q96L92 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX27Q96L92 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.01■□□□□ 0.47
SNX27Q96L92 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.01■□□□□ 0.47
SNX27Q96L92 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.01■□□□□ 0.47
SNX27Q96L92 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.01■□□□□ 0.47
SNX27Q96L92 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.01■□□□□ 0.47
SNX27Q96L92 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.01■□□□□ 0.47
SNX27Q96L92 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.01■□□□□ 0.47
SNX27Q96L92 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.01■□□□□ 0.47
SNX27Q96L92 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.01■□□□□ 0.47
SNX27Q96L92 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SNX27Q96L92 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX27Q96L92 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX27Q96L92 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX27Q96L92 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
SNX27Q96L92 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX27Q96L92 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.01■□□□□ 0.47
SNX27Q96L92 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 AC105020.1-201ENST00000435356 2205 ntBASIC18■□□□□ 0.47
SNX27Q96L92 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18■□□□□ 0.47
SNX27Q96L92 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
SNX27Q96L92 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SNX27Q96L92 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18■□□□□ 0.47
SNX27Q96L92 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18■□□□□ 0.47
SNX27Q96L92 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18■□□□□ 0.47
SNX27Q96L92 KRT18P32-201ENST00000424695 1287 ntBASIC18■□□□□ 0.47
SNX27Q96L92 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18■□□□□ 0.47
SNX27Q96L92 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
SNX27Q96L92 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18■□□□□ 0.47
SNX27Q96L92 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
SNX27Q96L92 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 IGHV3-62-201ENST00000520057 340 ntBASIC18■□□□□ 0.47
SNX27Q96L92 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18■□□□□ 0.47
SNX27Q96L92 AC109322.1-201ENST00000524499 1264 ntBASIC18■□□□□ 0.47
SNX27Q96L92 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18■□□□□ 0.47
SNX27Q96L92 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SNX27Q96L92 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SNX27Q96L92 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
SNX27Q96L92 KRT8P23-201ENST00000560090 1207 ntBASIC18■□□□□ 0.47
SNX27Q96L92 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18■□□□□ 0.47
SNX27Q96L92 AC008267.7-201ENST00000624570 1194 ntBASIC18■□□□□ 0.47
SNX27Q96L92 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18■□□□□ 0.47
SNX27Q96L92 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18■□□□□ 0.47
SNX27Q96L92 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
SNX27Q96L92 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
SNX27Q96L92 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18■□□□□ 0.47
SNX27Q96L92 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18■□□□□ 0.47
SNX27Q96L92 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SNX27Q96L92 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNX27Q96L92 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.99■□□□□ 0.47
SNX27Q96L92 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNX27Q96L92 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms