Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.57■□□□□ 0.56
HPS3Q969F9 AC010654.1-201ENST00000615722 808 ntBASIC18.57■□□□□ 0.56
HPS3Q969F9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
HPS3Q969F9 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.57■□□□□ 0.56
HPS3Q969F9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS3Q969F9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HPS3Q969F9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HPS3Q969F9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HPS3Q969F9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HPS3Q969F9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS3Q969F9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HPS3Q969F9 LINC02199-201ENST00000506655 2702 ntBASIC18.57■□□□□ 0.56
HPS3Q969F9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HPS3Q969F9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.57■□□□□ 0.56
HPS3Q969F9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS3Q969F9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HPS3Q969F9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS3Q969F9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.57■□□□□ 0.56
HPS3Q969F9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.57■□□□□ 0.56
HPS3Q969F9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
HPS3Q969F9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS3Q969F9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HPS3Q969F9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 AL031731.1-201ENST00000642131 2094 ntBASIC18.56■□□□□ 0.56
HPS3Q969F9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 IL9RP2-201ENST00000423948 1312 ntBASIC18.56■□□□□ 0.56
HPS3Q969F9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS3Q969F9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HPS3Q969F9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.56■□□□□ 0.56
HPS3Q969F9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS3Q969F9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.56■□□□□ 0.56
HPS3Q969F9 Z83851.2-201ENST00000609564 659 ntBASIC18.56■□□□□ 0.56
HPS3Q969F9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.56■□□□□ 0.56
HPS3Q969F9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS3Q969F9 AC008741.2-201ENST00000612792 3115 ntBASIC18.56■□□□□ 0.56
HPS3Q969F9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.56■□□□□ 0.56
HPS3Q969F9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HPS3Q969F9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS3Q969F9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
HPS3Q969F9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HPS3Q969F9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HPS3Q969F9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS3Q969F9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS3Q969F9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS3Q969F9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS3Q969F9 GGT4P-201ENST00000623672 1708 ntBASIC18.55■□□□□ 0.56
HPS3Q969F9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HPS3Q969F9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.55■□□□□ 0.56
HPS3Q969F9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS3Q969F9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS3Q969F9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS3Q969F9 AC026396.1-201ENST00000419388 421 ntBASIC18.55■□□□□ 0.56
HPS3Q969F9 HCG4B-203ENST00000450128 991 ntBASIC18.55■□□□□ 0.56
HPS3Q969F9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS3Q969F9 AC034105.1-201ENST00000563488 319 ntBASIC18.55■□□□□ 0.56
HPS3Q969F9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS3Q969F9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.55■□□□□ 0.56
HPS3Q969F9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS3Q969F9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
HPS3Q969F9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HPS3Q969F9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS3Q969F9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HPS3Q969F9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.55■□□□□ 0.56
HPS3Q969F9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS3Q969F9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS3Q969F9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.55■□□□□ 0.56
HPS3Q969F9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS3Q969F9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.55■□□□□ 0.56
HPS3Q969F9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS3Q969F9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.54■□□□□ 0.56
HPS3Q969F9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS3Q969F9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HPS3Q969F9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.54■□□□□ 0.56
HPS3Q969F9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS3Q969F9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.54■□□□□ 0.56
HPS3Q969F9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HPS3Q969F9 AC007967.2-201ENST00000432613 625 ntBASIC18.54■□□□□ 0.56
HPS3Q969F9 PRSS29P-201ENST00000440800 595 ntBASIC18.54■□□□□ 0.56
HPS3Q969F9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HPS3Q969F9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.54■□□□□ 0.56
HPS3Q969F9 RPL13AP23-201ENST00000480739 586 ntBASIC18.54■□□□□ 0.56
HPS3Q969F9 CXCL1P1-201ENST00000502804 216 ntBASIC18.54■□□□□ 0.56
HPS3Q969F9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.54■□□□□ 0.56
HPS3Q969F9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HPS3Q969F9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS3Q969F9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.54■□□□□ 0.56
HPS3Q969F9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms