Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 IMPDH1P4-201ENST00000445028 1534 ntBASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 AC063926.2-201ENST00000623766 1308 ntBASIC25.67■■□□□ 1.7
CASKIN1Q8WXD9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 AC004233.3-201ENST00000607794 1269 ntBASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC25.66■■□□□ 1.7
CASKIN1Q8WXD9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC25.65■■□□□ 1.7
CASKIN1Q8WXD9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC25.64■■□□□ 1.7
CASKIN1Q8WXD9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC25.64■■□□□ 1.7
CASKIN1Q8WXD9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CASKIN1Q8WXD9 AC114501.2-201ENST00000439631 535 ntBASIC25.64■■□□□ 1.7
CASKIN1Q8WXD9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC25.64■■□□□ 1.7
CASKIN1Q8WXD9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC25.64■■□□□ 1.7
CASKIN1Q8WXD9 AC140912.1-201ENST00000577171 1054 ntBASIC25.64■■□□□ 1.7
CASKIN1Q8WXD9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC25.64■■□□□ 1.7
CASKIN1Q8WXD9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CASKIN1Q8WXD9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC25.64■■□□□ 1.7
CASKIN1Q8WXD9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CASKIN1Q8WXD9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CASKIN1Q8WXD9 PCGF3-213ENST00000620529 1899 ntBASIC25.64■■□□□ 1.69
CASKIN1Q8WXD9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC25.64■■□□□ 1.69
CASKIN1Q8WXD9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CASKIN1Q8WXD9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC25.64■■□□□ 1.69
CASKIN1Q8WXD9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
CASKIN1Q8WXD9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CASKIN1Q8WXD9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CASKIN1Q8WXD9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 CR383656.12-201ENST00000549567 513 ntBASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 WASH4P-201ENST00000564273 1246 ntBASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 AL358472.5-202ENST00000641448 1267 ntBASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 AC078925.2-201ENST00000624013 1973 ntBASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms