Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 LINC01144-201ENST00000626198 1710 ntBASIC17.9■□□□□ 0.46
LMO3Q8TAP4 BCL2-203ENST00000589955 5011 ntBASIC17.9■□□□□ 0.46
LMO3Q8TAP4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 AC007967.2-201ENST00000432613 625 ntBASIC17.9■□□□□ 0.46
LMO3Q8TAP4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 AC106730.1-201ENST00000566722 1090 ntBASIC17.9■□□□□ 0.46
LMO3Q8TAP4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 AC004877.2-201ENST00000623941 599 ntBASIC17.9■□□□□ 0.46
LMO3Q8TAP4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LMO3Q8TAP4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LMO3Q8TAP4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.46
LMO3Q8TAP4 AC025580.3-201ENST00000617932 1424 ntBASIC17.89■□□□□ 0.46
LMO3Q8TAP4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LMO3Q8TAP4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LMO3Q8TAP4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.89■□□□□ 0.46
LMO3Q8TAP4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.89■□□□□ 0.46
LMO3Q8TAP4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LMO3Q8TAP4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
LMO3Q8TAP4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 PMS2P4-201ENST00000412466 1052 ntBASIC17.89■□□□□ 0.45
LMO3Q8TAP4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 AC023141.13-201ENST00000604991 943 ntBASIC17.89■□□□□ 0.45
LMO3Q8TAP4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.89■□□□□ 0.45
LMO3Q8TAP4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.88■□□□□ 0.45
LMO3Q8TAP4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LMO3Q8TAP4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.88■□□□□ 0.45
LMO3Q8TAP4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.88■□□□□ 0.45
LMO3Q8TAP4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LMO3Q8TAP4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LMO3Q8TAP4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LMO3Q8TAP4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LMO3Q8TAP4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
LMO3Q8TAP4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LMO3Q8TAP4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LMO3Q8TAP4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms