Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 AL512361.1-201ENST00000554200 418 ntBASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 AP005482.1-201ENST00000563722 1273 ntBASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 AC234783.1-201ENST00000441761 496 ntBASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 MTND6P24-201ENST00000440466 518 ntBASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 AC093724.1-201ENST00000448659 1027 ntBASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP43Q8NDM7 CEP83-AS1-201ENST00000623122 2482 ntBASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 AC087499.6-201ENST00000411576 835 ntBASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 AL645728.1-201ENST00000366221 2101 ntBASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CFAP43Q8NDM7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 GNAQP1-201ENST00000444815 1067 ntBASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 COX11-210ENST00000639671 696 ntBASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CFAP43Q8NDM7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 REXO1L6P-201ENST00000603433 1515 ntBASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 AL512343.1-201ENST00000605837 169 ntBASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 RN7SL828P-201ENST00000607615 303 ntBASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 AL589739.1-201ENST00000607720 493 ntBASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 SPDYE19P-201ENST00000338590 713 ntBASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC25.77■■□□□ 1.72
CFAP43Q8NDM7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms