Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC155Q8N6L0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 AC002056.1-201ENST00000395613 760 ntBASIC19■□□□□ 0.63
CCDC155Q8N6L0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC155Q8N6L0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC155Q8N6L0 HLA-J-203ENST00000494367 1087 ntBASIC19■□□□□ 0.63
CCDC155Q8N6L0 NMU-203ENST00000507338 658 ntTSL 3 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 AC022145.2-201ENST00000598203 171 ntBASIC19■□□□□ 0.63
CCDC155Q8N6L0 BSG-214ENST00000614867 960 ntTSL 3 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC155Q8N6L0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC155Q8N6L0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC155Q8N6L0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC155Q8N6L0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC155Q8N6L0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19■□□□□ 0.63
CCDC155Q8N6L0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 AC093512.1-201ENST00000617969 520 ntBASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 AC129492.6-201ENST00000611383 1305 ntBASIC18.99■□□□□ 0.63
CCDC155Q8N6L0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC155Q8N6L0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC155Q8N6L0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms