Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.07■□□□□ 0.48
HERC6Q8IVU3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HERC6Q8IVU3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HERC6Q8IVU3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HERC6Q8IVU3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.07■□□□□ 0.48
HERC6Q8IVU3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.07■□□□□ 0.48
HERC6Q8IVU3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HERC6Q8IVU3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HERC6Q8IVU3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 AC087499.5-201ENST00000452760 1342 ntBASIC18.06■□□□□ 0.48
HERC6Q8IVU3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 AC098614.1-201ENST00000368528 745 ntBASIC18.06■□□□□ 0.48
HERC6Q8IVU3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 MIR6799-201ENST00000620297 69 ntBASIC18.06■□□□□ 0.48
HERC6Q8IVU3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HERC6Q8IVU3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 AL035456.1-201ENST00000456064 1369 ntBASIC18.05■□□□□ 0.48
HERC6Q8IVU3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 GIMAP3P-201ENST00000495150 836 ntBASIC18.05■□□□□ 0.48
HERC6Q8IVU3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 AC010336.2-201ENST00000564226 506 ntBASIC18.05■□□□□ 0.48
HERC6Q8IVU3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 TEX28P1-201ENST00000613479 1221 ntBASIC18.05■□□□□ 0.48
HERC6Q8IVU3 TEX28P2-201ENST00000617764 1221 ntBASIC18.05■□□□□ 0.48
HERC6Q8IVU3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HERC6Q8IVU3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 AC131009.4-201ENST00000624048 1740 ntBASIC18.04■□□□□ 0.48
HERC6Q8IVU3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
HERC6Q8IVU3 MPDU1-223ENST00000582151 728 ntBASIC18.04■□□□□ 0.48
HERC6Q8IVU3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms