Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 PGAM5P1-201ENST00000518923 814 ntBASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 KRT19P2-202ENST00000557173 1012 ntBASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 MIR3909-201ENST00000579518 119 ntBASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 AL513190.1-201ENST00000621254 727 ntBASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 PMS2P7-201ENST00000506558 1336 ntBASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.08□□□□□ -0.16
FAM90A1Q86YD7 AC025580.3-201ENST00000617932 1424 ntBASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 CROCCP1-201ENST00000426910 5675 ntBASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 AC040169.1-201ENST00000565382 521 ntBASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 AC092865.6-201ENST00000642101 219 ntBASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 AL118508.1-201ENST00000613502 2345 ntBASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
FAM90A1Q86YD7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 AC023274.1-201ENST00000418278 595 ntBASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 PDPK2P-202ENST00000562415 1191 ntBASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 AL031432.2-201ENST00000566714 459 ntBASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 AL928711.1-201ENST00000570165 459 ntBASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM90A1Q86YD7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms