Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
ALYREFQ86V81 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALYREFQ86V81 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALYREFQ86V81 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALYREFQ86V81 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALYREFQ86V81 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALYREFQ86V81 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALYREFQ86V81 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.6■□□□□ 0.41
ALYREFQ86V81 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
ALYREFQ86V81 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.6■□□□□ 0.41
ALYREFQ86V81 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ALYREFQ86V81 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 AC006504.4-201ENST00000592118 1568 ntBASIC17.59■□□□□ 0.41
ALYREFQ86V81 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 AC005237.2-201ENST00000434368 219 ntBASIC17.59■□□□□ 0.41
ALYREFQ86V81 DDX43P3-201ENST00000441064 443 ntBASIC17.59■□□□□ 0.41
ALYREFQ86V81 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 IGHV3-65-201ENST00000523210 341 ntBASIC17.59■□□□□ 0.41
ALYREFQ86V81 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 AGGF1P2-201ENST00000426656 2106 ntBASIC17.59■□□□□ 0.41
ALYREFQ86V81 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALYREFQ86V81 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ALYREFQ86V81 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ALYREFQ86V81 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.58■□□□□ 0.41
ALYREFQ86V81 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ALYREFQ86V81 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ALYREFQ86V81 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
ALYREFQ86V81 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ALYREFQ86V81 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.58■□□□□ 0.4
ALYREFQ86V81 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ALYREFQ86V81 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALYREFQ86V81 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALYREFQ86V81 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALYREFQ86V81 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALYREFQ86V81 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALYREFQ86V81 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.58■□□□□ 0.4
ALYREFQ86V81 MTCL1P1-201ENST00000446207 792 ntBASIC17.58■□□□□ 0.4
ALYREFQ86V81 TIMM8BP1-201ENST00000452384 211 ntBASIC17.58■□□□□ 0.4
ALYREFQ86V81 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALYREFQ86V81 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.58■□□□□ 0.4
ALYREFQ86V81 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.58■□□□□ 0.4
ALYREFQ86V81 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.58■□□□□ 0.4
ALYREFQ86V81 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.58■□□□□ 0.4
ALYREFQ86V81 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.58■□□□□ 0.4
ALYREFQ86V81 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.58■□□□□ 0.4
ALYREFQ86V81 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALYREFQ86V81 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALYREFQ86V81 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.58■□□□□ 0.4
ALYREFQ86V81 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.58■□□□□ 0.4
ALYREFQ86V81 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALYREFQ86V81 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALYREFQ86V81 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALYREFQ86V81 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALYREFQ86V81 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALYREFQ86V81 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.57■□□□□ 0.4
ALYREFQ86V81 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
ALYREFQ86V81 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ALYREFQ86V81 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALYREFQ86V81 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms