Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 AL033527.4-201ENST00000641026 673 ntBASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 AC108860.2-201ENST00000562760 2183 ntBASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
OTOP1Q7RTM1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.27■□□□□ 0.67
OTOP1Q7RTM1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
OTOP1Q7RTM1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 LINC02012-201ENST00000608206 1725 ntBASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
OTOP1Q7RTM1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 AC011495.1-201ENST00000498085 584 ntBASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 AL138918.1-201ENST00000568306 659 ntBASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 AC004840.1-201ENST00000636359 365 ntBASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 AC087499.5-201ENST00000452760 1342 ntBASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
OTOP1Q7RTM1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
OTOP1Q7RTM1 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms