Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP45Q70EL2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
USP45Q70EL2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP45Q70EL2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP45Q70EL2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.78■□□□□ 0.28
USP45Q70EL2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP45Q70EL2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP45Q70EL2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
USP45Q70EL2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP45Q70EL2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP45Q70EL2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP45Q70EL2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP45Q70EL2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP45Q70EL2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP45Q70EL2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
USP45Q70EL2 KRT8P39-201ENST00000396270 1433 ntBASIC16.78■□□□□ 0.28
USP45Q70EL2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP45Q70EL2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
USP45Q70EL2 AC022211.2-201ENST00000585075 2527 ntBASIC16.77■□□□□ 0.28
USP45Q70EL2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.77■□□□□ 0.28
USP45Q70EL2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.77■□□□□ 0.28
USP45Q70EL2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
USP45Q70EL2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
USP45Q70EL2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.77■□□□□ 0.28
USP45Q70EL2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.77■□□□□ 0.28
USP45Q70EL2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.77■□□□□ 0.28
USP45Q70EL2 HTR5BP-201ENST00000430851 1154 ntBASIC16.77■□□□□ 0.28
USP45Q70EL2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 ACTG1P14-201ENST00000446382 1122 ntBASIC16.77■□□□□ 0.28
USP45Q70EL2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.77■□□□□ 0.28
USP45Q70EL2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
USP45Q70EL2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.77■□□□□ 0.28
USP45Q70EL2 ALG1L5P-201ENST00000482043 771 ntBASIC16.77■□□□□ 0.28
USP45Q70EL2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.77■□□□□ 0.28
USP45Q70EL2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.77■□□□□ 0.28
USP45Q70EL2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.77■□□□□ 0.28
USP45Q70EL2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
USP45Q70EL2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.77■□□□□ 0.28
USP45Q70EL2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 AL161645.1-201ENST00000622716 1255 ntBASIC16.77■□□□□ 0.28
USP45Q70EL2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP45Q70EL2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
USP45Q70EL2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
USP45Q70EL2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP45Q70EL2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP45Q70EL2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
USP45Q70EL2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
USP45Q70EL2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP45Q70EL2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
USP45Q70EL2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
USP45Q70EL2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.77■□□□□ 0.27
USP45Q70EL2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP45Q70EL2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.76■□□□□ 0.27
USP45Q70EL2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
USP45Q70EL2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
USP45Q70EL2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 RPSAP43-201ENST00000402237 625 ntBASIC16.76■□□□□ 0.27
USP45Q70EL2 MIR1233-2-201ENST00000408138 82 ntBASIC16.76■□□□□ 0.27
USP45Q70EL2 MIR1233-1-201ENST00000408722 82 ntBASIC16.76■□□□□ 0.27
USP45Q70EL2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.76■□□□□ 0.27
USP45Q70EL2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.76■□□□□ 0.27
USP45Q70EL2 HLA-J-202ENST00000469281 1241 ntBASIC16.76■□□□□ 0.27
USP45Q70EL2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.76■□□□□ 0.27
USP45Q70EL2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 AL603756.1-201ENST00000606511 2163 ntBASIC16.76■□□□□ 0.27
USP45Q70EL2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
USP45Q70EL2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
USP45Q70EL2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
USP45Q70EL2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
USP45Q70EL2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
USP45Q70EL2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
USP45Q70EL2 AD000864.1-201ENST00000624076 2295 ntBASIC16.76■□□□□ 0.27
USP45Q70EL2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP45Q70EL2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms