Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NHLRC1Q6VVB1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 AC009078.2-202ENST00000463353 338 ntBASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 AC107918.2-201ENST00000530817 355 ntBASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 AL773604.1-201ENST00000617417 272 ntBASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NHLRC1Q6VVB1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 GGTLC5P-201ENST00000617623 998 ntBASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 AC079328.2-201ENST00000561241 3354 ntBASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 HLA-A-201ENST00000376802 1334 ntBASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 AC006277.1-201ENST00000624348 1610 ntBASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 OR6D1P-203ENST00000641209 4860 ntBASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NHLRC1Q6VVB1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms