Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SHC4Q6S5L8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC4Q6S5L8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHC4Q6S5L8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.9■□□□□ 0.62
SHC4Q6S5L8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.89■□□□□ 0.62
SHC4Q6S5L8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SHC4Q6S5L8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SHC4Q6S5L8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 GPAA1P2-202ENST00000606848 1787 ntBASIC18.89■□□□□ 0.61
SHC4Q6S5L8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 AC079781.3-201ENST00000449110 356 ntBASIC18.89■□□□□ 0.61
SHC4Q6S5L8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 AC105339.3-201ENST00000560043 636 ntBASIC18.89■□□□□ 0.61
SHC4Q6S5L8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 AL596087.1-201ENST00000400979 1969 ntBASIC18.89■□□□□ 0.61
SHC4Q6S5L8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 AC129492.6-201ENST00000611383 1305 ntBASIC18.89■□□□□ 0.61
SHC4Q6S5L8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHC4Q6S5L8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 AC087641.1-201ENST00000557561 1021 ntBASIC18.88■□□□□ 0.61
SHC4Q6S5L8 AC005412.3-201ENST00000580309 715 ntBASIC18.88■□□□□ 0.61
SHC4Q6S5L8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
SHC4Q6S5L8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 KRT18P67-201ENST00000432816 1264 ntBASIC18.87■□□□□ 0.61
SHC4Q6S5L8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.87■□□□□ 0.61
SHC4Q6S5L8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.87■□□□□ 0.61
SHC4Q6S5L8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHC4Q6S5L8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHC4Q6S5L8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHC4Q6S5L8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.86■□□□□ 0.61
SHC4Q6S5L8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms