Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 PCGF3-213ENST00000620529 1899 ntBASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 AP002472.1-201ENST00000577490 586 ntBASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.3■□□□□ 0.84
TTC41PQ6P2S7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 LINC01144-201ENST00000626198 1710 ntBASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC41PQ6P2S7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 MIR940-201ENST00000401276 94 ntBASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
TTC41PQ6P2S7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC41PQ6P2S7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TTC41PQ6P2S7 AC023274.1-201ENST00000418278 595 ntBASIC20.27■□□□□ 0.84
TTC41PQ6P2S7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.27■□□□□ 0.84
TTC41PQ6P2S7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC41PQ6P2S7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC41PQ6P2S7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms