Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 OR7E47P-204ENST00000575924 449 ntBASIC17.39■□□□□ 0.37
LRRC38Q5VT99 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.39■□□□□ 0.37
LRRC38Q5VT99 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 PCGF3-213ENST00000620529 1899 ntBASIC17.39■□□□□ 0.37
LRRC38Q5VT99 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.39■□□□□ 0.37
LRRC38Q5VT99 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.38■□□□□ 0.37
LRRC38Q5VT99 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 AC012640.2-201ENST00000561606 901 ntBASIC17.38■□□□□ 0.37
LRRC38Q5VT99 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 AC010654.1-201ENST00000615722 808 ntBASIC17.38■□□□□ 0.37
LRRC38Q5VT99 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.38■□□□□ 0.37
LRRC38Q5VT99 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC38Q5VT99 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 AP002414.3-201ENST00000589352 1468 ntBASIC17.37■□□□□ 0.37
LRRC38Q5VT99 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 FAM185BP-201ENST00000443595 716 ntBASIC17.37■□□□□ 0.37
LRRC38Q5VT99 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 AC020765.3-201ENST00000613051 740 ntBASIC17.37■□□□□ 0.37
LRRC38Q5VT99 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC38Q5VT99 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 PRSS29P-201ENST00000440800 595 ntBASIC17.36■□□□□ 0.37
LRRC38Q5VT99 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 AC108073.2-201ENST00000464002 357 ntBASIC17.36■□□□□ 0.37
LRRC38Q5VT99 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 FAM215A-202ENST00000632077 792 ntBASIC17.36■□□□□ 0.37
LRRC38Q5VT99 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 AL596087.1-201ENST00000400979 1969 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms