Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 AL009183.1-201ENST00000603760 355 ntBASIC15.34■□□□□ 0.05
PRAMEF20Q5VT98 AC099522.2-201ENST00000607001 744 ntBASIC15.34■□□□□ 0.05
PRAMEF20Q5VT98 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.34■□□□□ 0.05
PRAMEF20Q5VT98 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF20Q5VT98 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF20Q5VT98 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.34■□□□□ 0.05
PRAMEF20Q5VT98 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
PRAMEF20Q5VT98 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.33■□□□□ 0.05
PRAMEF20Q5VT98 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.33■□□□□ 0.05
PRAMEF20Q5VT98 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PRAMEF20Q5VT98 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRAMEF20Q5VT98 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRAMEF20Q5VT98 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PRAMEF20Q5VT98 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 AP006288.1-201ENST00000446065 395 ntBASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 MIR4492-201ENST00000581627 80 ntBASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 AP001160.2-201ENST00000596071 487 ntBASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 AL671710.1-201ENST00000610245 2349 ntBASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF20Q5VT98 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 AL355306.1-201ENST00000415580 579 ntBASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 TIMM8BP1-201ENST00000452384 211 ntBASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 AC006277.1-201ENST00000624348 1610 ntBASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEF20Q5VT98 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms