Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 DUX4L26-201ENST00000489078 1255 ntBASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 DUX4L17-201ENST00000557360 1267 ntBASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 AL023973.1-201ENST00000624619 620 ntBASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ANKRD55Q3KP44 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 LINC02228-204ENST00000642115 2962 ntBASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 AC117947.1-201ENST00000427448 529 ntBASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 AC103564.2-201ENST00000432853 1299 ntBASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 ZNF444P1-201ENST00000559497 298 ntBASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.97□□□□□ -0.17
ANKRD55Q3KP44 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ANKRD55Q3KP44 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms