Protein–RNA interactions for Protein: Q15223

NECTIN1, Nectin-1, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1Q15223 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NECTIN1Q15223 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NECTIN1Q15223 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NECTIN1Q15223 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NECTIN1Q15223 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NECTIN1Q15223 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NECTIN1Q15223 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NECTIN1Q15223 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.83■□□□□ 0.77
NECTIN1Q15223 BX640515.1-201ENST00000617215 977 ntBASIC19.83■□□□□ 0.77
NECTIN1Q15223 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.83■□□□□ 0.76
NECTIN1Q15223 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NECTIN1Q15223 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NECTIN1Q15223 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.83■□□□□ 0.76
NECTIN1Q15223 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
NECTIN1Q15223 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NECTIN1Q15223 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NECTIN1Q15223 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NECTIN1Q15223 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.83■□□□□ 0.76
NECTIN1Q15223 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NECTIN1Q15223 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NECTIN1Q15223 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NECTIN1Q15223 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NECTIN1Q15223 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NECTIN1Q15223 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
NECTIN1Q15223 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.82■□□□□ 0.76
NECTIN1Q15223 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
NECTIN1Q15223 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.82■□□□□ 0.76
NECTIN1Q15223 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.82■□□□□ 0.76
NECTIN1Q15223 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.82■□□□□ 0.76
NECTIN1Q15223 SLC25A1P1-201ENST00000528351 927 ntBASIC19.82■□□□□ 0.76
NECTIN1Q15223 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.82■□□□□ 0.76
NECTIN1Q15223 AC064836.3-201ENST00000607928 673 ntBASIC19.82■□□□□ 0.76
NECTIN1Q15223 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.82■□□□□ 0.76
NECTIN1Q15223 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NECTIN1Q15223 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
NECTIN1Q15223 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.82■□□□□ 0.76
NECTIN1Q15223 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 LINC01144-201ENST00000626198 1710 ntBASIC19.82■□□□□ 0.76
NECTIN1Q15223 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NECTIN1Q15223 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 AL590627.1-203ENST00000421194 1026 ntBASIC19.81■□□□□ 0.76
NECTIN1Q15223 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 AL031055.1-201ENST00000606362 631 ntBASIC19.81■□□□□ 0.76
NECTIN1Q15223 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.81■□□□□ 0.76
NECTIN1Q15223 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NECTIN1Q15223 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms