Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CBX1P83916 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CBX1P83916 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 AC036111.1-201ENST00000533973 1582 ntBASIC17.55■□□□□ 0.4
CBX1P83916 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CBX1P83916 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.55■□□□□ 0.4
CBX1P83916 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.55■□□□□ 0.4
CBX1P83916 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.55■□□□□ 0.4
CBX1P83916 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.55■□□□□ 0.4
CBX1P83916 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX1P83916 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CBX1P83916 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX1P83916 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX1P83916 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 LINC01230-201ENST00000625222 3017 ntBASIC17.55■□□□□ 0.4
CBX1P83916 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CBX1P83916 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CBX1P83916 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX1P83916 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX1P83916 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX1P83916 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX1P83916 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX1P83916 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX1P83916 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CBX1P83916 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX1P83916 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX1P83916 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX1P83916 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX1P83916 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX1P83916 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX1P83916 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.54■□□□□ 0.4
CBX1P83916 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX1P83916 AL023284.2-201ENST00000405850 579 ntBASIC17.54■□□□□ 0.4
CBX1P83916 AC026396.1-201ENST00000419388 421 ntBASIC17.54■□□□□ 0.4
CBX1P83916 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CBX1P83916 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.54■□□□□ 0.4
CBX1P83916 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.54■□□□□ 0.4
CBX1P83916 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX1P83916 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC17.54■□□□□ 0.4
CBX1P83916 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.54■□□□□ 0.4
CBX1P83916 AC006504.5-208ENST00000588784 2401 ntBASIC17.54■□□□□ 0.4
CBX1P83916 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CBX1P83916 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.54■□□□□ 0.4
CBX1P83916 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.54■□□□□ 0.4
CBX1P83916 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX1P83916 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CBX1P83916 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CBX1P83916 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CBX1P83916 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX1P83916 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX1P83916 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX1P83916 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX1P83916 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CBX1P83916 AL390755.1-201ENST00000623716 2027 ntBASIC17.54■□□□□ 0.4
CBX1P83916 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.53■□□□□ 0.4
CBX1P83916 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CBX1P83916 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC17.53■□□□□ 0.4
CBX1P83916 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 CDC14C-201ENST00000428251 1719 ntBASIC17.53■□□□□ 0.4
CBX1P83916 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CBX1P83916 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CBX1P83916 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
CBX1P83916 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CBX1P83916 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CBX1P83916 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.53■□□□□ 0.4
CBX1P83916 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.53■□□□□ 0.4
CBX1P83916 DGCR9-201ENST00000609630 2415 ntBASIC17.53■□□□□ 0.4
CBX1P83916 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC17.53■□□□□ 0.4
CBX1P83916 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CBX1P83916 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.53■□□□□ 0.4
CBX1P83916 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.53■□□□□ 0.4
CBX1P83916 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX1P83916 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms