Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ASIC1P78348 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
ASIC1P78348 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.72■□□□□ 0.59
ASIC1P78348 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ASIC1P78348 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 MRPL20P1-201ENST00000400819 433 ntBASIC18.72■□□□□ 0.59
ASIC1P78348 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.72■□□□□ 0.59
ASIC1P78348 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
ASIC1P78348 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.72■□□□□ 0.59
ASIC1P78348 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.72■□□□□ 0.59
ASIC1P78348 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.72■□□□□ 0.59
ASIC1P78348 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.72■□□□□ 0.59
ASIC1P78348 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.72■□□□□ 0.59
ASIC1P78348 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.72■□□□□ 0.59
ASIC1P78348 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ASIC1P78348 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 SNX33P1-201ENST00000592116 1762 ntBASIC18.72■□□□□ 0.59
ASIC1P78348 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.72■□□□□ 0.59
ASIC1P78348 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.72■□□□□ 0.59
ASIC1P78348 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.72■□□□□ 0.59
ASIC1P78348 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ASIC1P78348 AC129492.6-201ENST00000611383 1305 ntBASIC18.72■□□□□ 0.59
ASIC1P78348 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ASIC1P78348 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.72■□□□□ 0.59
ASIC1P78348 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ASIC1P78348 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ASIC1P78348 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
ASIC1P78348 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ASIC1P78348 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ASIC1P78348 AL671710.1-201ENST00000610245 2349 ntBASIC18.71■□□□□ 0.59
ASIC1P78348 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ASIC1P78348 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ASIC1P78348 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ASIC1P78348 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ASIC1P78348 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ASIC1P78348 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.71■□□□□ 0.59
ASIC1P78348 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.71■□□□□ 0.59
ASIC1P78348 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.71■□□□□ 0.59
ASIC1P78348 AC004790.2-201ENST00000623588 572 ntBASIC18.71■□□□□ 0.59
ASIC1P78348 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ASIC1P78348 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.71■□□□□ 0.59
ASIC1P78348 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ASIC1P78348 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ASIC1P78348 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.71■□□□□ 0.59
ASIC1P78348 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.71■□□□□ 0.59
ASIC1P78348 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ASIC1P78348 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.71■□□□□ 0.59
ASIC1P78348 AL353732.1-201ENST00000569618 1459 ntBASIC18.71■□□□□ 0.59
ASIC1P78348 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
ASIC1P78348 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.71■□□□□ 0.58
ASIC1P78348 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
ASIC1P78348 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ASIC1P78348 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
ASIC1P78348 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.7■□□□□ 0.58
ASIC1P78348 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ASIC1P78348 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
ASIC1P78348 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ASIC1P78348 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ASIC1P78348 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 AC098831.1-202ENST00000438821 336 ntBASIC18.7■□□□□ 0.58
ASIC1P78348 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.7■□□□□ 0.58
ASIC1P78348 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.7■□□□□ 0.58
ASIC1P78348 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
ASIC1P78348 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.7■□□□□ 0.58
ASIC1P78348 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ASIC1P78348 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
ASIC1P78348 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ASIC1P78348 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.7■□□□□ 0.58
ASIC1P78348 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ASIC1P78348 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.69■□□□□ 0.58
ASIC1P78348 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.69■□□□□ 0.58
ASIC1P78348 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.69■□□□□ 0.58
ASIC1P78348 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms