Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SNX33P1-201ENST00000592116 1762 ntBASIC17.45■□□□□ 0.38
CDH6P55285 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 SLC22A20-204ENST00000530038 1673 ntBASIC17.45■□□□□ 0.38
CDH6P55285 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH6P55285 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH6P55285 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH6P55285 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDH6P55285 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH6P55285 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH6P55285 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH6P55285 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDH6P55285 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CDH6P55285 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.45■□□□□ 0.38
CDH6P55285 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 AC108073.2-201ENST00000464002 357 ntBASIC17.45■□□□□ 0.38
CDH6P55285 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.45■□□□□ 0.38
CDH6P55285 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH6P55285 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.45■□□□□ 0.38
CDH6P55285 SLC25A6P4-201ENST00000586535 553 ntBASIC17.45■□□□□ 0.38
CDH6P55285 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.45■□□□□ 0.38
CDH6P55285 MIR7706-201ENST00000613747 67 ntBASIC17.45■□□□□ 0.38
CDH6P55285 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH6P55285 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH6P55285 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH6P55285 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDH6P55285 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 AC129492.6-201ENST00000611383 1305 ntBASIC17.45■□□□□ 0.38
CDH6P55285 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH6P55285 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CDH6P55285 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CDH6P55285 AL671710.1-201ENST00000610245 2349 ntBASIC17.44■□□□□ 0.38
CDH6P55285 AL353732.1-201ENST00000569618 1459 ntBASIC17.44■□□□□ 0.38
CDH6P55285 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH6P55285 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH6P55285 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.44■□□□□ 0.38
CDH6P55285 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH6P55285 MRPL3P1-201ENST00000400109 1033 ntBASIC17.44■□□□□ 0.38
CDH6P55285 MRPL20P1-201ENST00000400819 433 ntBASIC17.44■□□□□ 0.38
CDH6P55285 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH6P55285 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH6P55285 AC093909.1-201ENST00000504731 1122 ntBASIC17.44■□□□□ 0.38
CDH6P55285 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH6P55285 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH6P55285 AP001005.1-201ENST00000571755 1248 ntBASIC17.44■□□□□ 0.38
CDH6P55285 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH6P55285 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDH6P55285 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH6P55285 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH6P55285 AC004790.2-201ENST00000623588 572 ntBASIC17.44■□□□□ 0.38
CDH6P55285 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDH6P55285 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH6P55285 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDH6P55285 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH6P55285 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH6P55285 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH6P55285 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH6P55285 TNRC18P3-201ENST00000441896 2691 ntBASIC17.44■□□□□ 0.38
CDH6P55285 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH6P55285 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
CDH6P55285 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH6P55285 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDH6P55285 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms