Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.92□□□□□ -0.02
LHX2P50458 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LHX2P50458 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.92□□□□□ -0.02
LHX2P50458 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.92□□□□□ -0.02
LHX2P50458 AL603756.1-201ENST00000606511 2163 ntBASIC14.92□□□□□ -0.02
LHX2P50458 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX2P50458 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX2P50458 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX2P50458 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX2P50458 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.92□□□□□ -0.02
LHX2P50458 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.92□□□□□ -0.02
LHX2P50458 AL512652.2-201ENST00000625156 1716 ntBASIC14.92□□□□□ -0.02
LHX2P50458 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.92□□□□□ -0.02
LHX2P50458 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.92□□□□□ -0.02
LHX2P50458 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX2P50458 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.91□□□□□ -0.02
LHX2P50458 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LHX2P50458 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.91□□□□□ -0.02
LHX2P50458 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.91□□□□□ -0.02
LHX2P50458 KRT18P32-201ENST00000424695 1287 ntBASIC14.91□□□□□ -0.02
LHX2P50458 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.91□□□□□ -0.02
LHX2P50458 FAM58DP-201ENST00000428076 619 ntBASIC14.91□□□□□ -0.02
LHX2P50458 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.91□□□□□ -0.02
LHX2P50458 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.91□□□□□ -0.02
LHX2P50458 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.91□□□□□ -0.02
LHX2P50458 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.91□□□□□ -0.02
LHX2P50458 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.91□□□□□ -0.02
LHX2P50458 AC084121.4-201ENST00000641598 221 ntBASIC14.91□□□□□ -0.02
LHX2P50458 AF228730.8-201ENST00000642140 221 ntBASIC14.91□□□□□ -0.02
LHX2P50458 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.91□□□□□ -0.02
LHX2P50458 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LHX2P50458 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LHX2P50458 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
LHX2P50458 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LHX2P50458 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.91□□□□□ -0.02
LHX2P50458 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LHX2P50458 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.91□□□□□ -0.02
LHX2P50458 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LHX2P50458 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.91□□□□□ -0.02
LHX2P50458 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.91□□□□□ -0.02
LHX2P50458 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.9□□□□□ -0.02
LHX2P50458 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
LHX2P50458 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LHX2P50458 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX2P50458 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LHX2P50458 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LHX2P50458 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX2P50458 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LHX2P50458 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LHX2P50458 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LHX2P50458 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX2P50458 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX2P50458 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX2P50458 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LHX2P50458 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX2P50458 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX2P50458 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LHX2P50458 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.9□□□□□ -0.02
LHX2P50458 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LHX2P50458 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.9□□□□□ -0.02
LHX2P50458 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LHX2P50458 AC109322.1-201ENST00000524499 1264 ntBASIC14.9□□□□□ -0.02
LHX2P50458 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
LHX2P50458 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.9□□□□□ -0.02
LHX2P50458 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.9□□□□□ -0.02
LHX2P50458 AL138918.1-201ENST00000568306 659 ntBASIC14.9□□□□□ -0.02
LHX2P50458 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.9□□□□□ -0.02
LHX2P50458 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.9□□□□□ -0.02
LHX2P50458 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.9□□□□□ -0.02
LHX2P50458 LINC00628-201ENST00000628516 1289 ntBASIC14.9□□□□□ -0.02
LHX2P50458 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LHX2P50458 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.9□□□□□ -0.02
LHX2P50458 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LHX2P50458 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.9□□□□□ -0.02
LHX2P50458 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms