Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.44■□□□□ 0.54
CPT1AP50416 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.44■□□□□ 0.54
CPT1AP50416 RN7SL692P-201ENST00000464677 288 ntBASIC18.44■□□□□ 0.54
CPT1AP50416 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPT1AP50416 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.44■□□□□ 0.54
CPT1AP50416 AL596325.1-201ENST00000563991 1082 ntBASIC18.44■□□□□ 0.54
CPT1AP50416 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.44■□□□□ 0.54
CPT1AP50416 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.44■□□□□ 0.54
CPT1AP50416 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.44■□□□□ 0.54
CPT1AP50416 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CPT1AP50416 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CPT1AP50416 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.44■□□□□ 0.54
CPT1AP50416 AC092053.1-201ENST00000605787 1936 ntBASIC18.44■□□□□ 0.54
CPT1AP50416 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPT1AP50416 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPT1AP50416 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.44■□□□□ 0.54
CPT1AP50416 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CPT1AP50416 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.44■□□□□ 0.54
CPT1AP50416 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPT1AP50416 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.43■□□□□ 0.54
CPT1AP50416 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPT1AP50416 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.43■□□□□ 0.54
CPT1AP50416 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CPT1AP50416 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPT1AP50416 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPT1AP50416 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CPT1AP50416 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.43■□□□□ 0.54
CPT1AP50416 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CPT1AP50416 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPT1AP50416 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPT1AP50416 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.43■□□□□ 0.54
CPT1AP50416 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
CPT1AP50416 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CPT1AP50416 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CPT1AP50416 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
CPT1AP50416 RPL37AP1-201ENST00000412502 279 ntBASIC18.43■□□□□ 0.54
CPT1AP50416 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.43■□□□□ 0.54
CPT1AP50416 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.43■□□□□ 0.54
CPT1AP50416 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.43■□□□□ 0.54
CPT1AP50416 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.43■□□□□ 0.54
CPT1AP50416 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.43■□□□□ 0.54
CPT1AP50416 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.43■□□□□ 0.54
CPT1AP50416 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPT1AP50416 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.43■□□□□ 0.54
CPT1AP50416 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPT1AP50416 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPT1AP50416 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPT1AP50416 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.43■□□□□ 0.54
CPT1AP50416 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.43■□□□□ 0.54
CPT1AP50416 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.43■□□□□ 0.54
CPT1AP50416 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPT1AP50416 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.43■□□□□ 0.54
CPT1AP50416 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CPT1AP50416 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPT1AP50416 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CPT1AP50416 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.42■□□□□ 0.54
CPT1AP50416 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CPT1AP50416 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 NEFHP1-201ENST00000412845 2629 ntBASIC18.42■□□□□ 0.54
CPT1AP50416 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CPT1AP50416 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.42■□□□□ 0.54
CPT1AP50416 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.42■□□□□ 0.54
CPT1AP50416 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CPT1AP50416 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CPT1AP50416 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.42■□□□□ 0.54
CPT1AP50416 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.42■□□□□ 0.54
CPT1AP50416 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 NME2P1-201ENST00000426182 414 ntBASIC18.42■□□□□ 0.54
CPT1AP50416 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.42■□□□□ 0.54
CPT1AP50416 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.42■□□□□ 0.54
CPT1AP50416 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.42■□□□□ 0.54
CPT1AP50416 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.42■□□□□ 0.54
CPT1AP50416 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.42■□□□□ 0.54
CPT1AP50416 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.42■□□□□ 0.54
CPT1AP50416 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 AC009407.1-201ENST00000568958 598 ntBASIC18.42■□□□□ 0.54
CPT1AP50416 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.42■□□□□ 0.54
CPT1AP50416 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.42■□□□□ 0.54
CPT1AP50416 AL844908.2-201ENST00000609461 460 ntBASIC18.42■□□□□ 0.54
CPT1AP50416 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.42■□□□□ 0.54
CPT1AP50416 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.42■□□□□ 0.54
CPT1AP50416 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPT1AP50416 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.41■□□□□ 0.54
CPT1AP50416 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.41■□□□□ 0.54
CPT1AP50416 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.41■□□□□ 0.54
CPT1AP50416 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CPT1AP50416 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CPT1AP50416 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms