Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.34■□□□□ 0.53
USP8P40818 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.34■□□□□ 0.53
USP8P40818 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
USP8P40818 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.34■□□□□ 0.53
USP8P40818 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.34■□□□□ 0.53
USP8P40818 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.34■□□□□ 0.53
USP8P40818 AL353135.1-201ENST00000606729 504 ntBASIC18.34■□□□□ 0.53
USP8P40818 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USP8P40818 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
USP8P40818 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
USP8P40818 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USP8P40818 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
USP8P40818 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.34■□□□□ 0.53
USP8P40818 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP8P40818 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
USP8P40818 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
USP8P40818 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USP8P40818 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
USP8P40818 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP8P40818 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP8P40818 PCDHB17P-201ENST00000539533 2393 ntBASIC18.33■□□□□ 0.53
USP8P40818 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP8P40818 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP8P40818 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP8P40818 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
USP8P40818 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
USP8P40818 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP8P40818 PCDHA14-201ENST00000506751 2298 ntBASIC18.33■□□□□ 0.53
USP8P40818 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP8P40818 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USP8P40818 AL590787.1-201ENST00000568856 1315 ntBASIC18.33■□□□□ 0.53
USP8P40818 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.33■□□□□ 0.52
USP8P40818 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.33■□□□□ 0.52
USP8P40818 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.33■□□□□ 0.52
USP8P40818 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
USP8P40818 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
USP8P40818 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
USP8P40818 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
USP8P40818 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
USP8P40818 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP8P40818 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
USP8P40818 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.32■□□□□ 0.52
USP8P40818 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
USP8P40818 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
USP8P40818 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.32■□□□□ 0.52
USP8P40818 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.32■□□□□ 0.52
USP8P40818 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
USP8P40818 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.32■□□□□ 0.52
USP8P40818 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.32■□□□□ 0.52
USP8P40818 AC139887.3-201ENST00000568585 713 ntBASIC18.32■□□□□ 0.52
USP8P40818 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.32■□□□□ 0.52
USP8P40818 AL589182.2-201ENST00000619332 1049 ntBASIC18.32■□□□□ 0.52
USP8P40818 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.32■□□□□ 0.52
USP8P40818 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.32■□□□□ 0.52
USP8P40818 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.32■□□□□ 0.52
USP8P40818 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 AC092850.2-201ENST00000623821 2697 ntBASIC18.32■□□□□ 0.52
USP8P40818 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
USP8P40818 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
USP8P40818 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP8P40818 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms