Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.66□□□□□ -0.06
GDNFP39905 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 ME2P1-201ENST00000426028 1970 ntBASIC14.66□□□□□ -0.06
GDNFP39905 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.66□□□□□ -0.06
GDNFP39905 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 AC016734.2-201ENST00000624325 1377 ntBASIC14.66□□□□□ -0.06
GDNFP39905 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 MYCLP1-201ENST00000372451 1075 ntBASIC14.66□□□□□ -0.06
GDNFP39905 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.66□□□□□ -0.06
GDNFP39905 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.66□□□□□ -0.06
GDNFP39905 KRT8P26-201ENST00000534154 1276 ntBASIC14.66□□□□□ -0.06
GDNFP39905 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GDNFP39905 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.66□□□□□ -0.06
GDNFP39905 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
GDNFP39905 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
GDNFP39905 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GDNFP39905 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 AL358472.4-201ENST00000633140 710 ntBASIC14.66□□□□□ -0.06
GDNFP39905 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.66□□□□□ -0.06
GDNFP39905 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GDNFP39905 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.66□□□□□ -0.06
GDNFP39905 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.66□□□□□ -0.06
GDNFP39905 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDNFP39905 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.65□□□□□ -0.06
GDNFP39905 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.65□□□□□ -0.06
GDNFP39905 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.65□□□□□ -0.06
GDNFP39905 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 IER3-202ENST00000376377 1350 ntBASIC14.65□□□□□ -0.06
GDNFP39905 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.65□□□□□ -0.06
GDNFP39905 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
GDNFP39905 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
GDNFP39905 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 ARMC10P1-201ENST00000313754 855 ntBASIC14.65□□□□□ -0.06
GDNFP39905 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.65□□□□□ -0.06
GDNFP39905 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
GDNFP39905 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
GDNFP39905 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.65□□□□□ -0.06
GDNFP39905 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.65□□□□□ -0.06
GDNFP39905 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.65□□□□□ -0.06
GDNFP39905 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
GDNFP39905 FRMD8P1-201ENST00000440433 1524 ntBASIC14.65□□□□□ -0.06
GDNFP39905 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
GDNFP39905 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.65□□□□□ -0.06
GDNFP39905 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDNFP39905 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
GDNFP39905 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDNFP39905 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GDNFP39905 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
GDNFP39905 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.64□□□□□ -0.07
GDNFP39905 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.64□□□□□ -0.07
GDNFP39905 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.64□□□□□ -0.07
GDNFP39905 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GDNFP39905 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDNFP39905 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDNFP39905 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDNFP39905 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms