Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP6V1AP38606 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP6V1AP38606 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP6V1AP38606 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V1AP38606 AL138688.1-201ENST00000624851 1594 ntBASIC21.17■□□□□ 0.98
ATP6V1AP38606 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V1AP38606 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP6V1AP38606 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP6V1AP38606 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V1AP38606 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V1AP38606 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V1AP38606 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V1AP38606 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V1AP38606 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 AC006277.1-201ENST00000624348 1610 ntBASIC21.16■□□□□ 0.98
ATP6V1AP38606 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V1AP38606 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 AC011495.1-201ENST00000498085 584 ntBASIC21.16■□□□□ 0.98
ATP6V1AP38606 AC093004.1-201ENST00000508850 424 ntBASIC21.16■□□□□ 0.98
ATP6V1AP38606 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V1AP38606 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V1AP38606 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V1AP38606 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V1AP38606 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ATP6V1AP38606 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V1AP38606 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V1AP38606 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V1AP38606 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP6V1AP38606 AL023806.1-201ENST00000603994 1649 ntBASIC21.15■□□□□ 0.98
ATP6V1AP38606 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V1AP38606 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V1AP38606 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP6V1AP38606 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V1AP38606 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ATP6V1AP38606 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP6V1AP38606 MIR1909-201ENST00000411312 80 ntBASIC21.15■□□□□ 0.98
ATP6V1AP38606 AC112492.5-201ENST00000421897 457 ntBASIC21.15■□□□□ 0.98
ATP6V1AP38606 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC21.15■□□□□ 0.98
ATP6V1AP38606 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V1AP38606 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V1AP38606 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP6V1AP38606 RAB35-202ENST00000534951 939 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP6V1AP38606 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
ATP6V1AP38606 AC007431.3-201ENST00000623221 587 ntBASIC21.15■□□□□ 0.98
ATP6V1AP38606 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V1AP38606 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V1AP38606 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V1AP38606 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP6V1AP38606 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V1AP38606 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V1AP38606 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP6V1AP38606 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC21.14■□□□□ 0.98
ATP6V1AP38606 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP6V1AP38606 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP6V1AP38606 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP6V1AP38606 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
ATP6V1AP38606 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP6V1AP38606 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP6V1AP38606 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP6V1AP38606 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.14■□□□□ 0.97
ATP6V1AP38606 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP6V1AP38606 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ATP6V1AP38606 RPS2P32-201ENST00000439199 892 ntBASIC21.14■□□□□ 0.97
ATP6V1AP38606 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC21.14■□□□□ 0.97
ATP6V1AP38606 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC21.14■□□□□ 0.97
ATP6V1AP38606 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP6V1AP38606 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.14■□□□□ 0.97
ATP6V1AP38606 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC21.14■□□□□ 0.97
ATP6V1AP38606 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ATP6V1AP38606 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP6V1AP38606 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP6V1AP38606 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6V1AP38606 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
ATP6V1AP38606 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6V1AP38606 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms