Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLCN1P35523 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CLCN1P35523 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.12■□□□□ 0.65
CLCN1P35523 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.12■□□□□ 0.65
CLCN1P35523 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLCN1P35523 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLCN1P35523 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLCN1P35523 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCN1P35523 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCN1P35523 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCN1P35523 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLCN1P35523 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 AC112698.1-201ENST00000510299 916 ntBASIC19.11■□□□□ 0.65
CLCN1P35523 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLCN1P35523 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.11■□□□□ 0.65
CLCN1P35523 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLCN1P35523 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19.11■□□□□ 0.65
CLCN1P35523 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLCN1P35523 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLCN1P35523 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLCN1P35523 Z83836.1-201ENST00000624605 1642 ntBASIC19.11■□□□□ 0.65
CLCN1P35523 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN1P35523 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN1P35523 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCN1P35523 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN1P35523 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCN1P35523 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLCN1P35523 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN1P35523 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLCN1P35523 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLCN1P35523 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN1P35523 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CLCN1P35523 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLCN1P35523 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN1P35523 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN1P35523 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.1■□□□□ 0.65
CLCN1P35523 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCN1P35523 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN1P35523 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCN1P35523 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLCN1P35523 AC007292.2-201ENST00000593524 1812 ntBASIC19.09■□□□□ 0.65
CLCN1P35523 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLCN1P35523 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCN1P35523 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 AC093525.9-201ENST00000624961 1746 ntBASIC19.09■□□□□ 0.65
CLCN1P35523 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCN1P35523 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CLCN1P35523 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.09■□□□□ 0.65
CLCN1P35523 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN1P35523 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.09■□□□□ 0.65
CLCN1P35523 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.09■□□□□ 0.65
CLCN1P35523 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCN1P35523 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCN1P35523 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.09■□□□□ 0.65
CLCN1P35523 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms