Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CTGFP29279 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CTGFP29279 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CTGFP29279 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.61■□□□□ 0.57
CTGFP29279 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.61■□□□□ 0.57
CTGFP29279 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTGFP29279 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.61■□□□□ 0.57
CTGFP29279 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CTGFP29279 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTGFP29279 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CTGFP29279 KRT8P39-201ENST00000396270 1433 ntBASIC18.61■□□□□ 0.57
CTGFP29279 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CTGFP29279 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.61■□□□□ 0.57
CTGFP29279 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTGFP29279 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTGFP29279 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CTGFP29279 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.61■□□□□ 0.57
CTGFP29279 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.61■□□□□ 0.57
CTGFP29279 AC099336.1-201ENST00000417053 1171 ntBASIC18.61■□□□□ 0.57
CTGFP29279 CTBP2P5-201ENST00000454986 1264 ntBASIC18.61■□□□□ 0.57
CTGFP29279 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTGFP29279 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.61■□□□□ 0.57
CTGFP29279 RRP7BP-205ENST00000566851 833 ntBASIC18.61■□□□□ 0.57
CTGFP29279 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.61■□□□□ 0.57
CTGFP29279 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTGFP29279 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTGFP29279 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTGFP29279 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
CTGFP29279 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CTGFP29279 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CTGFP29279 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTGFP29279 AL354751.1-201ENST00000412768 1863 ntBASIC18.6■□□□□ 0.57
CTGFP29279 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.6■□□□□ 0.57
CTGFP29279 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.6■□□□□ 0.57
CTGFP29279 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.6■□□□□ 0.57
CTGFP29279 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CTGFP29279 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CTGFP29279 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.6■□□□□ 0.57
CTGFP29279 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.6■□□□□ 0.57
CTGFP29279 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 MIR6069-201ENST00000620069 79 ntBASIC18.6■□□□□ 0.57
CTGFP29279 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CTGFP29279 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.6■□□□□ 0.57
CTGFP29279 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTGFP29279 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.6■□□□□ 0.57
CTGFP29279 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.6■□□□□ 0.57
CTGFP29279 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.59■□□□□ 0.57
CTGFP29279 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.59■□□□□ 0.57
CTGFP29279 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CTGFP29279 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.59■□□□□ 0.57
CTGFP29279 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.59■□□□□ 0.57
CTGFP29279 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CTGFP29279 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CTGFP29279 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.59■□□□□ 0.57
CTGFP29279 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.59■□□□□ 0.57
CTGFP29279 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.59■□□□□ 0.57
CTGFP29279 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.59■□□□□ 0.57
CTGFP29279 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.59■□□□□ 0.57
CTGFP29279 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.59■□□□□ 0.57
CTGFP29279 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.59■□□□□ 0.57
CTGFP29279 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.59■□□□□ 0.57
CTGFP29279 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.59■□□□□ 0.57
CTGFP29279 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.59■□□□□ 0.57
CTGFP29279 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CTGFP29279 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.59■□□□□ 0.57
CTGFP29279 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.59■□□□□ 0.57
CTGFP29279 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.59■□□□□ 0.57
CTGFP29279 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTGFP29279 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CTGFP29279 AC092053.1-201ENST00000605787 1936 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms