Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PTPN3P26045 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN3P26045 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN3P26045 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTPN3P26045 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PTPN3P26045 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN3P26045 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN3P26045 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.08■□□□□ 0.33
PTPN3P26045 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PTPN3P26045 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN3P26045 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN3P26045 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN3P26045 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN3P26045 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN3P26045 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.08■□□□□ 0.33
PTPN3P26045 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN3P26045 AC006449.5-201ENST00000610658 2098 ntBASIC17.08■□□□□ 0.33
PTPN3P26045 AL031731.1-201ENST00000642131 2094 ntBASIC17.08■□□□□ 0.33
PTPN3P26045 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.08■□□□□ 0.33
PTPN3P26045 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.08■□□□□ 0.33
PTPN3P26045 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PTPN3P26045 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN3P26045 GGT3P-204ENST00000453783 1664 ntBASIC17.08■□□□□ 0.32
PTPN3P26045 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PTPN3P26045 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN3P26045 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN3P26045 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PTPN3P26045 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN3P26045 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.08■□□□□ 0.32
PTPN3P26045 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.08■□□□□ 0.32
PTPN3P26045 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.08■□□□□ 0.32
PTPN3P26045 VN2R19P-201ENST00000442399 1052 ntBASIC17.08■□□□□ 0.32
PTPN3P26045 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.08■□□□□ 0.32
PTPN3P26045 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PTPN3P26045 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.08■□□□□ 0.32
PTPN3P26045 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.08■□□□□ 0.32
PTPN3P26045 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.08■□□□□ 0.32
PTPN3P26045 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN3P26045 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.08■□□□□ 0.32
PTPN3P26045 AP001350.2-201ENST00000625104 1094 ntBASIC17.08■□□□□ 0.32
PTPN3P26045 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN3P26045 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN3P26045 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
PTPN3P26045 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN3P26045 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.08■□□□□ 0.32
PTPN3P26045 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN3P26045 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN3P26045 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN3P26045 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
PTPN3P26045 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN3P26045 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
PTPN3P26045 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN3P26045 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PTPN3P26045 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN3P26045 GGT4P-201ENST00000623672 1708 ntBASIC17.07■□□□□ 0.32
PTPN3P26045 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 AC005052.1-201ENST00000625181 2492 ntBASIC17.07■□□□□ 0.32
PTPN3P26045 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN3P26045 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 CROCCP1-201ENST00000426910 5675 ntBASIC17.07■□□□□ 0.32
PTPN3P26045 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 IGLL3P-201ENST00000412472 434 ntBASIC17.07■□□□□ 0.32
PTPN3P26045 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.07■□□□□ 0.32
PTPN3P26045 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN3P26045 CXCL1P1-201ENST00000502804 216 ntBASIC17.07■□□□□ 0.32
PTPN3P26045 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN3P26045 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN3P26045 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.07■□□□□ 0.32
PTPN3P26045 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PTPN3P26045 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN3P26045 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN3P26045 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN3P26045 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.07■□□□□ 0.32
PTPN3P26045 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms