Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL8A2P25067 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
COL8A2P25067 AC092068.3-201ENST00000587894 2016 ntBASIC14.15□□□□□ -0.14
COL8A2P25067 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
COL8A2P25067 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
COL8A2P25067 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.15□□□□□ -0.14
COL8A2P25067 AC092474.2-201ENST00000424288 719 ntBASIC14.15□□□□□ -0.14
COL8A2P25067 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.15□□□□□ -0.14
COL8A2P25067 ADH5P3-201ENST00000433842 1137 ntBASIC14.15□□□□□ -0.14
COL8A2P25067 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.15□□□□□ -0.14
COL8A2P25067 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
COL8A2P25067 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.15□□□□□ -0.14
COL8A2P25067 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.15□□□□□ -0.14
COL8A2P25067 AL161645.1-201ENST00000622716 1255 ntBASIC14.15□□□□□ -0.14
COL8A2P25067 AP001350.2-201ENST00000625104 1094 ntBASIC14.15□□□□□ -0.14
COL8A2P25067 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.15□□□□□ -0.14
COL8A2P25067 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.15□□□□□ -0.14
COL8A2P25067 AL023806.1-201ENST00000603994 1649 ntBASIC14.15□□□□□ -0.14
COL8A2P25067 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
COL8A2P25067 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
COL8A2P25067 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
COL8A2P25067 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL8A2P25067 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.15□□□□□ -0.15
COL8A2P25067 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.14□□□□□ -0.15
COL8A2P25067 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.14□□□□□ -0.15
COL8A2P25067 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
COL8A2P25067 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
COL8A2P25067 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
COL8A2P25067 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
COL8A2P25067 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 AL139400.1-201ENST00000366220 510 ntBASIC14.14□□□□□ -0.15
COL8A2P25067 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.14□□□□□ -0.15
COL8A2P25067 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.14□□□□□ -0.15
COL8A2P25067 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.14□□□□□ -0.15
COL8A2P25067 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.14□□□□□ -0.15
COL8A2P25067 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.14□□□□□ -0.15
COL8A2P25067 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.14□□□□□ -0.15
COL8A2P25067 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.14□□□□□ -0.15
COL8A2P25067 AC124947.2-201ENST00000547118 1133 ntBASIC14.14□□□□□ -0.15
COL8A2P25067 AC243562.1-201ENST00000560672 389 ntBASIC14.14□□□□□ -0.15
COL8A2P25067 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.14□□□□□ -0.15
COL8A2P25067 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.14□□□□□ -0.15
COL8A2P25067 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.14□□□□□ -0.15
COL8A2P25067 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.14□□□□□ -0.15
COL8A2P25067 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
COL8A2P25067 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
COL8A2P25067 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.14□□□□□ -0.15
COL8A2P25067 PCDH8P1-201ENST00000428983 2773 ntBASIC14.14□□□□□ -0.15
COL8A2P25067 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.14□□□□□ -0.15
COL8A2P25067 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL8A2P25067 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms