Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFSF4P23510 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFSF4P23510 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.36□□□□□ -0.11
TNFSF4P23510 AP000347.1-202ENST00000435868 847 ntBASIC14.36□□□□□ -0.11
TNFSF4P23510 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFSF4P23510 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFSF4P23510 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFSF4P23510 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.36□□□□□ -0.11
TNFSF4P23510 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.36□□□□□ -0.11
TNFSF4P23510 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFSF4P23510 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.36□□□□□ -0.11
TNFSF4P23510 REXO1L3P-201ENST00000622202 1288 ntBASIC14.36□□□□□ -0.11
TNFSF4P23510 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFSF4P23510 AC010507.1-201ENST00000633895 436 ntBASIC14.36□□□□□ -0.11
TNFSF4P23510 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TNFSF4P23510 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFSF4P23510 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TNFSF4P23510 AL391005.1-201ENST00000623953 2435 ntBASIC14.36□□□□□ -0.11
TNFSF4P23510 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.36□□□□□ -0.11
TNFSF4P23510 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 BCAR1-209ENST00000546196 1340 ntBASIC14.36□□□□□ -0.11
TNFSF4P23510 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 AC108860.2-201ENST00000562760 2183 ntBASIC14.36□□□□□ -0.11
TNFSF4P23510 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFSF4P23510 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFSF4P23510 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.35□□□□□ -0.11
TNFSF4P23510 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.35□□□□□ -0.11
TNFSF4P23510 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 AC092053.1-201ENST00000605787 1936 ntBASIC14.35□□□□□ -0.11
TNFSF4P23510 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TNFSF4P23510 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TNFSF4P23510 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 IGLL3P-201ENST00000412472 434 ntBASIC14.35□□□□□ -0.11
TNFSF4P23510 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.35□□□□□ -0.11
TNFSF4P23510 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.35□□□□□ -0.11
TNFSF4P23510 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.35□□□□□ -0.11
TNFSF4P23510 AC107918.2-201ENST00000530817 355 ntBASIC14.35□□□□□ -0.11
TNFSF4P23510 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.35□□□□□ -0.11
TNFSF4P23510 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TNFSF4P23510 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.35□□□□□ -0.11
TNFSF4P23510 AC087641.1-201ENST00000557561 1021 ntBASIC14.35□□□□□ -0.11
TNFSF4P23510 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.35□□□□□ -0.11
TNFSF4P23510 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.35□□□□□ -0.11
TNFSF4P23510 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TNFSF4P23510 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.35□□□□□ -0.11
TNFSF4P23510 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.35□□□□□ -0.11
TNFSF4P23510 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 AC012569.1-201ENST00000591191 1524 ntBASIC14.35□□□□□ -0.11
TNFSF4P23510 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.35□□□□□ -0.11
TNFSF4P23510 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFSF4P23510 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.35□□□□□ -0.11
TNFSF4P23510 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
TNFSF4P23510 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TNFSF4P23510 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.34□□□□□ -0.11
TNFSF4P23510 AL121761.2-201ENST00000598007 1648 ntBASIC14.34□□□□□ -0.11
TNFSF4P23510 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFSF4P23510 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFSF4P23510 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms