Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NCLP19338 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLP19338 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.05■□□□□ 0.8
NCLP19338 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLP19338 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC20.05■□□□□ 0.8
NCLP19338 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCLP19338 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.05■□□□□ 0.8
NCLP19338 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.05■□□□□ 0.8
NCLP19338 MYCLP1-201ENST00000372451 1075 ntBASIC20.05■□□□□ 0.8
NCLP19338 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.05■□□□□ 0.8
NCLP19338 AL450487.1-201ENST00000426799 995 ntBASIC20.05■□□□□ 0.8
NCLP19338 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.05■□□□□ 0.8
NCLP19338 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NCLP19338 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLP19338 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC20.05■□□□□ 0.8
NCLP19338 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLP19338 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLP19338 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.05■□□□□ 0.8
NCLP19338 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLP19338 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLP19338 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLP19338 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
NCLP19338 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NCLP19338 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLP19338 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NCLP19338 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.04■□□□□ 0.8
NCLP19338 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCLP19338 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLP19338 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCLP19338 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.04■□□□□ 0.8
NCLP19338 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLP19338 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLP19338 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NCLP19338 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLP19338 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLP19338 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.04■□□□□ 0.8
NCLP19338 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.04■□□□□ 0.8
NCLP19338 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.04■□□□□ 0.8
NCLP19338 AP002414.4-201ENST00000589764 1148 ntBASIC20.04■□□□□ 0.8
NCLP19338 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.04■□□□□ 0.8
NCLP19338 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLP19338 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NCLP19338 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCLP19338 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCLP19338 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.04■□□□□ 0.8
NCLP19338 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.04■□□□□ 0.8
NCLP19338 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCLP19338 CYP2T1P-202ENST00000641596 2535 ntBASIC20.04■□□□□ 0.8
NCLP19338 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCLP19338 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 AC097374.2-201ENST00000618617 1306 ntBASIC20.03■□□□□ 0.8
NCLP19338 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NCLP19338 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NCLP19338 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.03■□□□□ 0.8
NCLP19338 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.03■□□□□ 0.8
NCLP19338 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NCLP19338 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.03■□□□□ 0.8
NCLP19338 AC007967.3-201ENST00000434308 558 ntBASIC20.03■□□□□ 0.8
NCLP19338 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.03■□□□□ 0.8
NCLP19338 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.03■□□□□ 0.8
NCLP19338 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
NCLP19338 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.03■□□□□ 0.8
NCLP19338 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NCLP19338 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.03■□□□□ 0.8
NCLP19338 AC019129.2-201ENST00000609837 1235 ntBASIC20.03■□□□□ 0.8
NCLP19338 AC012313.10-201ENST00000623509 926 ntBASIC20.03■□□□□ 0.8
NCLP19338 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.03■□□□□ 0.8
NCLP19338 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.03■□□□□ 0.8
NCLP19338 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC20.03■□□□□ 0.8
NCLP19338 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.03■□□□□ 0.8
NCLP19338 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCLP19338 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.02■□□□□ 0.8
NCLP19338 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NCLP19338 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.02■□□□□ 0.8
NCLP19338 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCLP19338 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCLP19338 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCLP19338 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NCLP19338 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.02■□□□□ 0.8
NCLP19338 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NCLP19338 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.02■□□□□ 0.8
NCLP19338 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.02■□□□□ 0.8
NCLP19338 MIR3652-201ENST00000579335 131 ntBASIC20.02■□□□□ 0.8
NCLP19338 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCLP19338 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
NCLP19338 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms