Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NELFEP18615 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NELFEP18615 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.65■□□□□ 0.26
NELFEP18615 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NELFEP18615 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.65■□□□□ 0.26
NELFEP18615 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.65■□□□□ 0.26
NELFEP18615 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.65■□□□□ 0.26
NELFEP18615 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.65■□□□□ 0.26
NELFEP18615 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.65■□□□□ 0.26
NELFEP18615 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.65■□□□□ 0.26
NELFEP18615 AC007967.2-201ENST00000432613 625 ntBASIC16.65■□□□□ 0.26
NELFEP18615 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.65■□□□□ 0.26
NELFEP18615 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.65■□□□□ 0.26
NELFEP18615 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.65■□□□□ 0.26
NELFEP18615 AC139530.3-201ENST00000620344 690 ntBASIC16.65■□□□□ 0.26
NELFEP18615 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NELFEP18615 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.65■□□□□ 0.26
NELFEP18615 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 AC060834.1-201ENST00000443027 2032 ntBASIC16.65■□□□□ 0.26
NELFEP18615 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NELFEP18615 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.65■□□□□ 0.26
NELFEP18615 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.65■□□□□ 0.26
NELFEP18615 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NELFEP18615 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.26
NELFEP18615 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NELFEP18615 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NELFEP18615 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NELFEP18615 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NELFEP18615 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.64■□□□□ 0.25
NELFEP18615 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.64■□□□□ 0.25
NELFEP18615 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.64■□□□□ 0.25
NELFEP18615 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
NELFEP18615 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NELFEP18615 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.64■□□□□ 0.25
NELFEP18615 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NELFEP18615 RPS15P9-201ENST00000494093 319 ntBASIC16.64■□□□□ 0.25
NELFEP18615 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.64■□□□□ 0.25
NELFEP18615 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.64■□□□□ 0.25
NELFEP18615 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.64■□□□□ 0.25
NELFEP18615 AC040169.1-201ENST00000565382 521 ntBASIC16.64■□□□□ 0.25
NELFEP18615 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.64■□□□□ 0.25
NELFEP18615 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.64■□□□□ 0.25
NELFEP18615 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.64■□□□□ 0.25
NELFEP18615 AC008667.4-201ENST00000607370 168 ntBASIC16.64■□□□□ 0.25
NELFEP18615 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
NELFEP18615 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.64■□□□□ 0.25
NELFEP18615 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.64■□□□□ 0.25
NELFEP18615 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NELFEP18615 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NELFEP18615 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.64■□□□□ 0.25
NELFEP18615 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
NELFEP18615 REXO1L11P-201ENST00000620964 1927 ntBASIC16.64■□□□□ 0.25
NELFEP18615 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
NELFEP18615 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.64■□□□□ 0.25
NELFEP18615 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NELFEP18615 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NELFEP18615 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.64■□□□□ 0.25
NELFEP18615 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.63■□□□□ 0.25
NELFEP18615 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NELFEP18615 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NELFEP18615 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NELFEP18615 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.63■□□□□ 0.25
NELFEP18615 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.63■□□□□ 0.25
NELFEP18615 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NELFEP18615 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NELFEP18615 GPR89P-201ENST00000407924 1495 ntBASIC16.63■□□□□ 0.25
NELFEP18615 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NELFEP18615 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NELFEP18615 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NELFEP18615 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NELFEP18615 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NELFEP18615 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.63■□□□□ 0.25
NELFEP18615 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NELFEP18615 LINC00982-205ENST00000420957 435 ntBASIC16.63■□□□□ 0.25
NELFEP18615 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.63■□□□□ 0.25
NELFEP18615 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NELFEP18615 IGHV3-65-201ENST00000523210 341 ntBASIC16.63■□□□□ 0.25
NELFEP18615 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
NELFEP18615 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.63■□□□□ 0.25
NELFEP18615 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.63■□□□□ 0.25
NELFEP18615 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.63■□□□□ 0.25
NELFEP18615 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.63■□□□□ 0.25
NELFEP18615 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.63■□□□□ 0.25
NELFEP18615 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.63■□□□□ 0.25
NELFEP18615 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NELFEP18615 AL353135.1-201ENST00000606729 504 ntBASIC16.63■□□□□ 0.25
NELFEP18615 AL805961.1-202ENST00000641562 540 ntBASIC16.63■□□□□ 0.25
NELFEP18615 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms