Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.72■□□□□ 0.43
PTPN1P18031 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN1P18031 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.72■□□□□ 0.43
PTPN1P18031 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN1P18031 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN1P18031 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
PTPN1P18031 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.72■□□□□ 0.43
PTPN1P18031 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN1P18031 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN1P18031 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN1P18031 AKAP8P1-201ENST00000434743 1349 ntBASIC17.72■□□□□ 0.43
PTPN1P18031 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN1P18031 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN1P18031 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN1P18031 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN1P18031 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN1P18031 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN1P18031 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN1P18031 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.71■□□□□ 0.43
PTPN1P18031 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
PTPN1P18031 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN1P18031 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPN1P18031 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN1P18031 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN1P18031 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN1P18031 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PTPN1P18031 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN1P18031 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN1P18031 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN1P18031 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN1P18031 KRT8P48-201ENST00000515599 1220 ntBASIC17.71■□□□□ 0.43
PTPN1P18031 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.71■□□□□ 0.43
PTPN1P18031 SNHG9-202ENST00000564014 471 ntBASIC17.71■□□□□ 0.43
PTPN1P18031 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.71■□□□□ 0.43
PTPN1P18031 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.71■□□□□ 0.43
PTPN1P18031 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.71■□□□□ 0.43
PTPN1P18031 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPN1P18031 AL513210.1-201ENST00000629608 234 ntBASIC17.71■□□□□ 0.43
PTPN1P18031 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN1P18031 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN1P18031 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN1P18031 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PTPN1P18031 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PTPN1P18031 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN1P18031 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.71■□□□□ 0.42
PTPN1P18031 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.71■□□□□ 0.42
PTPN1P18031 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPN1P18031 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 AC022211.2-201ENST00000585075 2527 ntBASIC17.7■□□□□ 0.42
PTPN1P18031 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 AL603756.1-201ENST00000606511 2163 ntBASIC17.7■□□□□ 0.42
PTPN1P18031 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPN1P18031 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPN1P18031 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPN1P18031 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 CNN2P11-201ENST00000429351 262 ntBASIC17.7■□□□□ 0.42
PTPN1P18031 SPDYE11-202ENST00000450699 704 ntBASIC17.7■□□□□ 0.42
PTPN1P18031 TIMM8BP1-201ENST00000452384 211 ntBASIC17.7■□□□□ 0.42
PTPN1P18031 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PTPN1P18031 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 AC243562.1-201ENST00000560672 389 ntBASIC17.7■□□□□ 0.42
PTPN1P18031 AL135744.1-201ENST00000565098 629 ntBASIC17.7■□□□□ 0.42
PTPN1P18031 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 SPDYE9P-201ENST00000570642 692 ntBASIC17.7■□□□□ 0.42
PTPN1P18031 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PTPN1P18031 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.7■□□□□ 0.42
PTPN1P18031 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPN1P18031 SPDYE10P-202ENST00000612005 668 ntBASIC17.7■□□□□ 0.42
PTPN1P18031 SPDYE8P-202ENST00000612377 668 ntBASIC17.7■□□□□ 0.42
PTPN1P18031 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 WASH6P-202ENST00000359512 1437 ntBASIC17.7■□□□□ 0.42
PTPN1P18031 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms