Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCF4P15884 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCF4P15884 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCF4P15884 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.48■□□□□ 0.39
TCF4P15884 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCF4P15884 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TCF4P15884 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCF4P15884 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.48■□□□□ 0.39
TCF4P15884 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
TCF4P15884 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCF4P15884 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TCF4P15884 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCF4P15884 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCF4P15884 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.48■□□□□ 0.39
TCF4P15884 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TCF4P15884 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCF4P15884 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCF4P15884 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TCF4P15884 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCF4P15884 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.48■□□□□ 0.39
TCF4P15884 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCF4P15884 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCF4P15884 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TCF4P15884 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.47■□□□□ 0.39
TCF4P15884 KRT8P39-201ENST00000396270 1433 ntBASIC17.47■□□□□ 0.39
TCF4P15884 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TCF4P15884 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.47■□□□□ 0.39
TCF4P15884 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TCF4P15884 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
TCF4P15884 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
TCF4P15884 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.47■□□□□ 0.39
TCF4P15884 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.47■□□□□ 0.39
TCF4P15884 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.47■□□□□ 0.39
TCF4P15884 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.47■□□□□ 0.39
TCF4P15884 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.47■□□□□ 0.39
TCF4P15884 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TCF4P15884 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 AL353732.1-201ENST00000569618 1459 ntBASIC17.47■□□□□ 0.39
TCF4P15884 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.47■□□□□ 0.39
TCF4P15884 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TCF4P15884 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.47■□□□□ 0.39
TCF4P15884 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 PCDHA1-201ENST00000378133 2726 ntBASIC17.47■□□□□ 0.39
TCF4P15884 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TCF4P15884 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.47■□□□□ 0.39
TCF4P15884 AC026691.1-201ENST00000602502 2017 ntBASIC17.47■□□□□ 0.39
TCF4P15884 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.47■□□□□ 0.39
TCF4P15884 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
TCF4P15884 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.47■□□□□ 0.39
TCF4P15884 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCF4P15884 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TCF4P15884 HLA-A-201ENST00000376802 1334 ntBASIC17.47■□□□□ 0.39
TCF4P15884 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.47■□□□□ 0.39
TCF4P15884 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.46■□□□□ 0.39
TCF4P15884 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.46■□□□□ 0.39
TCF4P15884 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCF4P15884 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCF4P15884 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCF4P15884 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCF4P15884 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCF4P15884 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TCF4P15884 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
TCF4P15884 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCF4P15884 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.46■□□□□ 0.39
TCF4P15884 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCF4P15884 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
TCF4P15884 MRPL20P1-201ENST00000400819 433 ntBASIC17.46■□□□□ 0.39
TCF4P15884 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
TCF4P15884 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCF4P15884 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.46■□□□□ 0.39
TCF4P15884 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
TCF4P15884 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.46■□□□□ 0.39
TCF4P15884 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.46■□□□□ 0.39
TCF4P15884 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.46■□□□□ 0.39
TCF4P15884 AL121894.2-201ENST00000602977 491 ntBASIC17.46■□□□□ 0.39
TCF4P15884 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.46■□□□□ 0.39
TCF4P15884 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.46■□□□□ 0.39
TCF4P15884 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.46■□□□□ 0.39
TCF4P15884 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCF4P15884 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCF4P15884 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.46■□□□□ 0.39
TCF4P15884 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
TCF4P15884 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.46■□□□□ 0.39
TCF4P15884 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCF4P15884 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms