Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.68■□□□□ 0.74
TOP1P11387 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
TOP1P11387 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TOP1P11387 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.68■□□□□ 0.74
TOP1P11387 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
TOP1P11387 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.67■□□□□ 0.74
TOP1P11387 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.67■□□□□ 0.74
TOP1P11387 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
TOP1P11387 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TOP1P11387 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.67■□□□□ 0.74
TOP1P11387 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 RPS8P6-201ENST00000426177 609 ntBASIC19.67■□□□□ 0.74
TOP1P11387 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.67■□□□□ 0.74
TOP1P11387 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.67■□□□□ 0.74
TOP1P11387 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.67■□□□□ 0.74
TOP1P11387 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.67■□□□□ 0.74
TOP1P11387 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.67■□□□□ 0.74
TOP1P11387 CYP2A7P1-201ENST00000595391 815 ntBASIC19.67■□□□□ 0.74
TOP1P11387 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.67■□□□□ 0.74
TOP1P11387 AC079781.4-201ENST00000641908 219 ntBASIC19.67■□□□□ 0.74
TOP1P11387 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TOP1P11387 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TOP1P11387 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
TOP1P11387 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TOP1P11387 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
TOP1P11387 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TOP1P11387 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TOP1P11387 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TOP1P11387 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP1P11387 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP1P11387 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP1P11387 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.66■□□□□ 0.74
TOP1P11387 DNAJB3-202ENST00000449667 1266 ntBASIC19.66■□□□□ 0.74
TOP1P11387 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TOP1P11387 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TOP1P11387 AP001160.2-201ENST00000596071 487 ntBASIC19.66■□□□□ 0.74
TOP1P11387 AL009183.1-201ENST00000603760 355 ntBASIC19.66■□□□□ 0.74
TOP1P11387 AC099522.2-201ENST00000607001 744 ntBASIC19.66■□□□□ 0.74
TOP1P11387 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TOP1P11387 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP1P11387 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TOP1P11387 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP1P11387 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP1P11387 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TOP1P11387 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TOP1P11387 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TOP1P11387 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TOP1P11387 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TOP1P11387 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP1P11387 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.66■□□□□ 0.74
TOP1P11387 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TOP1P11387 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.66■□□□□ 0.74
TOP1P11387 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP1P11387 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TOP1P11387 CROCCP1-201ENST00000426910 5675 ntBASIC19.65■□□□□ 0.74
TOP1P11387 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.65■□□□□ 0.74
TOP1P11387 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP1P11387 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.65■□□□□ 0.74
TOP1P11387 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP1P11387 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.65■□□□□ 0.74
TOP1P11387 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP1P11387 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP1P11387 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP1P11387 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
TOP1P11387 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TOP1P11387 AC060834.1-201ENST00000443027 2032 ntBASIC19.65■□□□□ 0.74
TOP1P11387 RNU1-129P-201ENST00000384064 167 ntBASIC19.65■□□□□ 0.74
TOP1P11387 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.65■□□□□ 0.74
TOP1P11387 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP1P11387 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TOP1P11387 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.65■□□□□ 0.74
TOP1P11387 U1.21-201ENST00000580816 167 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms