Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.79■□□□□ 0.6
HOXC6P09630 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXC6P09630 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.79■□□□□ 0.6
HOXC6P09630 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC6P09630 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXC6P09630 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXC6P09630 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HOXC6P09630 PP12613-201ENST00000424958 2230 ntBASIC18.79■□□□□ 0.6
HOXC6P09630 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HOXC6P09630 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXC6P09630 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC6P09630 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC6P09630 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC6P09630 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC6P09630 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC6P09630 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC6P09630 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC6P09630 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC6P09630 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXC6P09630 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC6P09630 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HOXC6P09630 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC6P09630 AC138969.3-201ENST00000546612 1459 ntBASIC18.78■□□□□ 0.6
HOXC6P09630 AC138932.2-201ENST00000548268 1459 ntBASIC18.78■□□□□ 0.6
HOXC6P09630 AC126755.4-201ENST00000549796 1459 ntBASIC18.78■□□□□ 0.6
HOXC6P09630 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HOXC6P09630 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC6P09630 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC6P09630 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC6P09630 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC6P09630 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC6P09630 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC6P09630 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC6P09630 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC6P09630 DFFBP1-201ENST00000433250 979 ntBASIC18.78■□□□□ 0.6
HOXC6P09630 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC6P09630 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.78■□□□□ 0.6
HOXC6P09630 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
HOXC6P09630 AL079307.3-201ENST00000556114 283 ntBASIC18.78■□□□□ 0.6
HOXC6P09630 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC6P09630 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.78■□□□□ 0.6
HOXC6P09630 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.78■□□□□ 0.6
HOXC6P09630 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC6P09630 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HOXC6P09630 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC6P09630 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC6P09630 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.78■□□□□ 0.6
HOXC6P09630 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC6P09630 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC6P09630 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXC6P09630 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXC6P09630 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HOXC6P09630 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXC6P09630 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.77■□□□□ 0.6
HOXC6P09630 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXC6P09630 AC013467.2-201ENST00000605472 835 ntBASIC18.77■□□□□ 0.6
HOXC6P09630 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC6P09630 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXC6P09630 AL391825.1-201ENST00000457671 1364 ntBASIC18.77■□□□□ 0.6
HOXC6P09630 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXC6P09630 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HOXC6P09630 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.77■□□□□ 0.59
HOXC6P09630 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HOXC6P09630 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HOXC6P09630 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HOXC6P09630 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC6P09630 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HOXC6P09630 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC6P09630 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC6P09630 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HOXC6P09630 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC6P09630 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HOXC6P09630 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
HOXC6P09630 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXC6P09630 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC6P09630 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC6P09630 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.76■□□□□ 0.59
HOXC6P09630 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HOXC6P09630 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXC6P09630 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC6P09630 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HOXC6P09630 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.76■□□□□ 0.59
HOXC6P09630 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC6P09630 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
HOXC6P09630 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC6P09630 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms