Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.77■□□□□ 0.6
CYP3A4P08684 AP000842.3-202ENST00000569238 1080 ntBASIC18.77■□□□□ 0.6
CYP3A4P08684 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.77■□□□□ 0.6
CYP3A4P08684 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.77■□□□□ 0.6
CYP3A4P08684 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.77■□□□□ 0.6
CYP3A4P08684 AC009093.7-201ENST00000623853 1223 ntBASIC18.77■□□□□ 0.6
CYP3A4P08684 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CYP3A4P08684 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.77■□□□□ 0.6
CYP3A4P08684 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP3A4P08684 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP3A4P08684 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.77■□□□□ 0.6
CYP3A4P08684 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP3A4P08684 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CYP3A4P08684 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CYP3A4P08684 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CYP3A4P08684 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.77■□□□□ 0.59
CYP3A4P08684 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CYP3A4P08684 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
CYP3A4P08684 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CYP3A4P08684 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CYP3A4P08684 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
CYP3A4P08684 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CYP3A4P08684 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP3A4P08684 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP3A4P08684 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CYP3A4P08684 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP3A4P08684 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.76■□□□□ 0.59
CYP3A4P08684 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CYP3A4P08684 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP3A4P08684 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP3A4P08684 HTR7P1-202ENST00000624664 4411 ntBASIC18.76■□□□□ 0.59
CYP3A4P08684 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP3A4P08684 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CYP3A4P08684 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CYP3A4P08684 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.76■□□□□ 0.59
CYP3A4P08684 AC005237.2-201ENST00000434368 219 ntBASIC18.76■□□□□ 0.59
CYP3A4P08684 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CYP3A4P08684 HLA-J-203ENST00000494367 1087 ntBASIC18.76■□□□□ 0.59
CYP3A4P08684 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.76■□□□□ 0.59
CYP3A4P08684 IGHV3-62-201ENST00000520057 340 ntBASIC18.76■□□□□ 0.59
CYP3A4P08684 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.76■□□□□ 0.59
CYP3A4P08684 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CYP3A4P08684 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP3A4P08684 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP3A4P08684 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CYP3A4P08684 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.76■□□□□ 0.59
CYP3A4P08684 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.76■□□□□ 0.59
CYP3A4P08684 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CYP3A4P08684 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CYP3A4P08684 AC073439.1-201ENST00000624121 1774 ntBASIC18.76■□□□□ 0.59
CYP3A4P08684 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.75■□□□□ 0.59
CYP3A4P08684 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.75■□□□□ 0.59
CYP3A4P08684 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CYP3A4P08684 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 AL139400.1-201ENST00000366220 510 ntBASIC18.75■□□□□ 0.59
CYP3A4P08684 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.75■□□□□ 0.59
CYP3A4P08684 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CYP3A4P08684 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.75■□□□□ 0.59
CYP3A4P08684 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.75■□□□□ 0.59
CYP3A4P08684 AC142381.1-201ENST00000426099 345 ntBASIC18.75■□□□□ 0.59
CYP3A4P08684 GPS2P2-201ENST00000430745 888 ntBASIC18.75■□□□□ 0.59
CYP3A4P08684 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.75■□□□□ 0.59
CYP3A4P08684 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 AC105233.2-201ENST00000523697 349 ntBASIC18.75■□□□□ 0.59
CYP3A4P08684 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.75■□□□□ 0.59
CYP3A4P08684 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 AF228730.5-201ENST00000530288 346 ntBASIC18.75■□□□□ 0.59
CYP3A4P08684 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.75■□□□□ 0.59
CYP3A4P08684 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.75■□□□□ 0.59
CYP3A4P08684 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.75■□□□□ 0.59
CYP3A4P08684 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.75■□□□□ 0.59
CYP3A4P08684 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
CYP3A4P08684 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.75■□□□□ 0.59
CYP3A4P08684 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CYP3A4P08684 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.75■□□□□ 0.59
CYP3A4P08684 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CYP3A4P08684 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CYP3A4P08684 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 FLJ38576-201ENST00000623820 2459 ntBASIC18.74■□□□□ 0.59
CYP3A4P08684 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.74■□□□□ 0.59
CYP3A4P08684 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms