Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZBED1O96006 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZBED1O96006 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZBED1O96006 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZBED1O96006 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ZBED1O96006 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.72■□□□□ 0.43
ZBED1O96006 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
ZBED1O96006 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.72■□□□□ 0.43
ZBED1O96006 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.72■□□□□ 0.43
ZBED1O96006 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ZBED1O96006 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ZBED1O96006 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.72■□□□□ 0.43
ZBED1O96006 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.72■□□□□ 0.43
ZBED1O96006 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
ZBED1O96006 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.72■□□□□ 0.43
ZBED1O96006 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.72■□□□□ 0.43
ZBED1O96006 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.72■□□□□ 0.43
ZBED1O96006 PDPK2P-202ENST00000562415 1191 ntBASIC17.72■□□□□ 0.43
ZBED1O96006 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.72■□□□□ 0.43
ZBED1O96006 MIR4515-201ENST00000584082 81 ntBASIC17.72■□□□□ 0.43
ZBED1O96006 AL645728.2-201ENST00000641974 660 ntBASIC17.72■□□□□ 0.43
ZBED1O96006 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ZBED1O96006 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.72■□□□□ 0.43
ZBED1O96006 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.72■□□□□ 0.43
ZBED1O96006 PCDHB17P-201ENST00000539533 2393 ntBASIC17.72■□□□□ 0.43
ZBED1O96006 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZBED1O96006 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.71■□□□□ 0.43
ZBED1O96006 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.71■□□□□ 0.43
ZBED1O96006 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZBED1O96006 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZBED1O96006 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ZBED1O96006 BX842568.4-201ENST00000421222 227 ntBASIC17.71■□□□□ 0.43
ZBED1O96006 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.71■□□□□ 0.43
ZBED1O96006 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.71■□□□□ 0.43
ZBED1O96006 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.71■□□□□ 0.43
ZBED1O96006 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.71■□□□□ 0.43
ZBED1O96006 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
ZBED1O96006 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZBED1O96006 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZBED1O96006 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
ZBED1O96006 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
ZBED1O96006 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ZBED1O96006 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZBED1O96006 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ZBED1O96006 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZBED1O96006 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.7■□□□□ 0.42
ZBED1O96006 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ZBED1O96006 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZBED1O96006 AC131009.4-201ENST00000624048 1740 ntBASIC17.7■□□□□ 0.42
ZBED1O96006 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ZBED1O96006 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
ZBED1O96006 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.7■□□□□ 0.42
ZBED1O96006 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.7■□□□□ 0.42
ZBED1O96006 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZBED1O96006 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ZBED1O96006 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.7■□□□□ 0.42
ZBED1O96006 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.7■□□□□ 0.42
ZBED1O96006 HCG4-201ENST00000418983 998 ntBASIC17.7■□□□□ 0.42
ZBED1O96006 MCCD1P2-201ENST00000423228 335 ntBASIC17.7■□□□□ 0.42
ZBED1O96006 AGGF1P2-201ENST00000426656 2106 ntBASIC17.7■□□□□ 0.42
ZBED1O96006 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.7■□□□□ 0.42
ZBED1O96006 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZBED1O96006 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms