Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 AC006538.1-201ENST00000567905 1585 ntBASIC17.54■□□□□ 0.4
BEST1O76090 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
BEST1O76090 AKAP8P1-201ENST00000434743 1349 ntBASIC17.54■□□□□ 0.4
BEST1O76090 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.54■□□□□ 0.4
BEST1O76090 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.54■□□□□ 0.4
BEST1O76090 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.54■□□□□ 0.4
BEST1O76090 FAM86C2P-203ENST00000528684 1004 ntBASIC17.54■□□□□ 0.4
BEST1O76090 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.54■□□□□ 0.4
BEST1O76090 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.54■□□□□ 0.4
BEST1O76090 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
BEST1O76090 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.54■□□□□ 0.4
BEST1O76090 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.54■□□□□ 0.4
BEST1O76090 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.54■□□□□ 0.4
BEST1O76090 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.54■□□□□ 0.4
BEST1O76090 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
BEST1O76090 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.54■□□□□ 0.4
BEST1O76090 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.54■□□□□ 0.4
BEST1O76090 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST1O76090 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
BEST1O76090 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.53■□□□□ 0.4
BEST1O76090 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.53■□□□□ 0.4
BEST1O76090 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.53■□□□□ 0.4
BEST1O76090 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
BEST1O76090 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.53■□□□□ 0.4
BEST1O76090 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.53■□□□□ 0.4
BEST1O76090 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.53■□□□□ 0.4
BEST1O76090 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.53■□□□□ 0.4
BEST1O76090 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.53■□□□□ 0.4
BEST1O76090 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.53■□□□□ 0.4
BEST1O76090 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 SPCS2P4-201ENST00000436160 681 ntBASIC17.53■□□□□ 0.4
BEST1O76090 LINC01225-203ENST00000563550 1244 ntBASIC17.53■□□□□ 0.4
BEST1O76090 AL138918.1-201ENST00000568306 659 ntBASIC17.53■□□□□ 0.4
BEST1O76090 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.53■□□□□ 0.4
BEST1O76090 AC079781.4-201ENST00000641908 219 ntBASIC17.53■□□□□ 0.4
BEST1O76090 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.53■□□□□ 0.4
BEST1O76090 NKILA-202ENST00000614771 2598 ntBASIC17.53■□□□□ 0.4
BEST1O76090 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BEST1O76090 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
BEST1O76090 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.53■□□□□ 0.4
BEST1O76090 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.53■□□□□ 0.4
BEST1O76090 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BEST1O76090 GGT4P-201ENST00000623672 1708 ntBASIC17.52■□□□□ 0.4
BEST1O76090 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST1O76090 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
BEST1O76090 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
BEST1O76090 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST1O76090 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.52■□□□□ 0.4
BEST1O76090 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.52■□□□□ 0.4
BEST1O76090 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST1O76090 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST1O76090 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST1O76090 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST1O76090 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.52■□□□□ 0.4
BEST1O76090 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.52■□□□□ 0.4
BEST1O76090 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
BEST1O76090 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.52■□□□□ 0.4
BEST1O76090 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
BEST1O76090 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
BEST1O76090 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST1O76090 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.52■□□□□ 0.4
BEST1O76090 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.52■□□□□ 0.4
BEST1O76090 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
BEST1O76090 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
BEST1O76090 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST1O76090 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BEST1O76090 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.52■□□□□ 0.39
BEST1O76090 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
BEST1O76090 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
BEST1O76090 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.52■□□□□ 0.39
BEST1O76090 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms