Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN11O75508 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN11O75508 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CLDN11O75508 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLDN11O75508 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN11O75508 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN11O75508 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN11O75508 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
CLDN11O75508 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN11O75508 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN11O75508 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN11O75508 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN11O75508 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.08■□□□□ 0.33
CLDN11O75508 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN11O75508 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDN11O75508 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CLDN11O75508 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN11O75508 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN11O75508 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN11O75508 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLDN11O75508 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN11O75508 AC016027.1-202ENST00000607927 1699 ntBASIC17.08■□□□□ 0.32
CLDN11O75508 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLDN11O75508 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN11O75508 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDN11O75508 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 TIMM8BP1-201ENST00000452384 211 ntBASIC17.08■□□□□ 0.32
CLDN11O75508 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDN11O75508 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN11O75508 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDN11O75508 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.08■□□□□ 0.32
CLDN11O75508 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLDN11O75508 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CLDN11O75508 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLDN11O75508 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
CLDN11O75508 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLDN11O75508 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 AC078925.2-201ENST00000624013 1973 ntBASIC17.08■□□□□ 0.32
CLDN11O75508 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLDN11O75508 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN11O75508 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLDN11O75508 AL512652.2-201ENST00000625156 1716 ntBASIC17.07■□□□□ 0.32
CLDN11O75508 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLDN11O75508 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN11O75508 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN11O75508 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN11O75508 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN11O75508 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLDN11O75508 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDN11O75508 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN11O75508 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN11O75508 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CLDN11O75508 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CLDN11O75508 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN11O75508 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN11O75508 CNN2P11-201ENST00000429351 262 ntBASIC17.07■□□□□ 0.32
CLDN11O75508 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN11O75508 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN11O75508 KRT18P34-201ENST00000488218 1270 ntBASIC17.07■□□□□ 0.32
CLDN11O75508 KRT8P48-201ENST00000515599 1220 ntBASIC17.07■□□□□ 0.32
CLDN11O75508 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN11O75508 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN11O75508 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDN11O75508 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLDN11O75508 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLDN11O75508 AC022145.2-201ENST00000598203 171 ntBASIC17.07■□□□□ 0.32
CLDN11O75508 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDN11O75508 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN11O75508 AL596442.2-201ENST00000610240 980 ntBASIC17.07■□□□□ 0.32
CLDN11O75508 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN11O75508 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN11O75508 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN11O75508 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN11O75508 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN11O75508 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN11O75508 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN11O75508 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN11O75508 AC022211.2-201ENST00000585075 2527 ntBASIC17.07■□□□□ 0.32
CLDN11O75508 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN11O75508 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN11O75508 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLDN11O75508 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN11O75508 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLDN11O75508 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN11O75508 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLDN11O75508 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN11O75508 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN11O75508 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms