Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.71■□□□□ 0.27
SUPT3HO75486 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.71■□□□□ 0.27
SUPT3HO75486 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SUPT3HO75486 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SUPT3HO75486 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.71■□□□□ 0.27
SUPT3HO75486 LINC02199-201ENST00000506655 2702 ntBASIC16.71■□□□□ 0.27
SUPT3HO75486 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SUPT3HO75486 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SUPT3HO75486 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SUPT3HO75486 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.71■□□□□ 0.27
SUPT3HO75486 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SUPT3HO75486 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.7■□□□□ 0.26
SUPT3HO75486 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.7■□□□□ 0.26
SUPT3HO75486 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.7■□□□□ 0.26
SUPT3HO75486 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.7■□□□□ 0.26
SUPT3HO75486 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.7■□□□□ 0.26
SUPT3HO75486 AL021920.2-201ENST00000624828 1351 ntBASIC16.7■□□□□ 0.26
SUPT3HO75486 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SUPT3HO75486 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SUPT3HO75486 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.7■□□□□ 0.26
SUPT3HO75486 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
SUPT3HO75486 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.7■□□□□ 0.26
SUPT3HO75486 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 AL645728.1-201ENST00000366221 2101 ntBASIC16.7■□□□□ 0.26
SUPT3HO75486 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SUPT3HO75486 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.7■□□□□ 0.26
SUPT3HO75486 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.7■□□□□ 0.26
SUPT3HO75486 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
SUPT3HO75486 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SUPT3HO75486 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SUPT3HO75486 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SUPT3HO75486 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.69■□□□□ 0.26
SUPT3HO75486 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.69■□□□□ 0.26
SUPT3HO75486 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
SUPT3HO75486 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.69■□□□□ 0.26
SUPT3HO75486 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.69■□□□□ 0.26
SUPT3HO75486 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SUPT3HO75486 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SUPT3HO75486 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.69■□□□□ 0.26
SUPT3HO75486 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.69■□□□□ 0.26
SUPT3HO75486 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.69■□□□□ 0.26
SUPT3HO75486 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.69■□□□□ 0.26
SUPT3HO75486 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SUPT3HO75486 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SUPT3HO75486 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.69■□□□□ 0.26
SUPT3HO75486 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SUPT3HO75486 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SUPT3HO75486 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SUPT3HO75486 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.68■□□□□ 0.26
SUPT3HO75486 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
SUPT3HO75486 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms