Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.7■□□□□ 0.1
CTNSO60931 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.7■□□□□ 0.1
CTNSO60931 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CTNSO60931 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CTNSO60931 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CTNSO60931 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 AP002472.1-201ENST00000577490 586 ntBASIC15.7■□□□□ 0.1
CTNSO60931 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
CTNSO60931 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CTNSO60931 AL031055.1-201ENST00000606362 631 ntBASIC15.7■□□□□ 0.1
CTNSO60931 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CTNSO60931 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.7■□□□□ 0.1
CTNSO60931 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.7■□□□□ 0.1
CTNSO60931 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.7■□□□□ 0.1
CTNSO60931 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.7■□□□□ 0.1
CTNSO60931 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTNSO60931 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CTNSO60931 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.7■□□□□ 0.1
CTNSO60931 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CTNSO60931 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CTNSO60931 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.69■□□□□ 0.1
CTNSO60931 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CTNSO60931 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CTNSO60931 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.69■□□□□ 0.1
CTNSO60931 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.69■□□□□ 0.1
CTNSO60931 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CTNSO60931 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.69■□□□□ 0.1
CTNSO60931 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.69■□□□□ 0.1
CTNSO60931 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.69■□□□□ 0.1
CTNSO60931 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 YBX2P1-201ENST00000394192 760 ntBASIC15.69■□□□□ 0.1
CTNSO60931 AC002056.1-201ENST00000395613 760 ntBASIC15.69■□□□□ 0.1
CTNSO60931 AC092474.2-201ENST00000424288 719 ntBASIC15.69■□□□□ 0.1
CTNSO60931 DNAJB3-201ENST00000446806 729 ntBASIC15.69■□□□□ 0.1
CTNSO60931 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.69■□□□□ 0.1
CTNSO60931 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.69■□□□□ 0.1
CTNSO60931 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.69■□□□□ 0.1
CTNSO60931 AC109635.5-201ENST00000533593 962 ntBASIC15.69■□□□□ 0.1
CTNSO60931 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.69■□□□□ 0.1
CTNSO60931 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.69■□□□□ 0.1
CTNSO60931 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.69■□□□□ 0.1
CTNSO60931 AL009183.1-201ENST00000603760 355 ntBASIC15.69■□□□□ 0.1
CTNSO60931 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CTNSO60931 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CTNSO60931 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.69■□□□□ 0.1
CTNSO60931 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.69■□□□□ 0.1
CTNSO60931 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.69■□□□□ 0.1
CTNSO60931 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CTNSO60931 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CTNSO60931 AC011676.5-201ENST00000624864 2660 ntBASIC15.69■□□□□ 0.1
CTNSO60931 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTNSO60931 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.68■□□□□ 0.1
CTNSO60931 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CTNSO60931 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTNSO60931 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.68■□□□□ 0.1
CTNSO60931 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTNSO60931 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTNSO60931 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CTNSO60931 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTNSO60931 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTNSO60931 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CTNSO60931 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTNSO60931 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTNSO60931 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms