Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OPHN1O60890 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OPHN1O60890 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.56■□□□□ 0.4
OPHN1O60890 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
OPHN1O60890 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OPHN1O60890 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OPHN1O60890 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.56■□□□□ 0.4
OPHN1O60890 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.56■□□□□ 0.4
OPHN1O60890 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.56■□□□□ 0.4
OPHN1O60890 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.56■□□□□ 0.4
OPHN1O60890 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.56■□□□□ 0.4
OPHN1O60890 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
OPHN1O60890 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OPHN1O60890 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
OPHN1O60890 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OPHN1O60890 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.56■□□□□ 0.4
OPHN1O60890 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
OPHN1O60890 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OPHN1O60890 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OPHN1O60890 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.56■□□□□ 0.4
OPHN1O60890 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
OPHN1O60890 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.55■□□□□ 0.4
OPHN1O60890 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
OPHN1O60890 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 AL162727.3-201ENST00000635661 2787 ntBASIC17.55■□□□□ 0.4
OPHN1O60890 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
OPHN1O60890 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 AGGF1P2-201ENST00000426656 2106 ntBASIC17.55■□□□□ 0.4
OPHN1O60890 AC009947.1-201ENST00000444350 727 ntBASIC17.55■□□□□ 0.4
OPHN1O60890 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.55■□□□□ 0.4
OPHN1O60890 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
OPHN1O60890 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.55■□□□□ 0.4
OPHN1O60890 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.55■□□□□ 0.4
OPHN1O60890 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.55■□□□□ 0.4
OPHN1O60890 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.55■□□□□ 0.4
OPHN1O60890 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.55■□□□□ 0.4
OPHN1O60890 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.55■□□□□ 0.4
OPHN1O60890 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.55■□□□□ 0.4
OPHN1O60890 PGM5P2-202ENST00000637225 1043 ntBASIC17.55■□□□□ 0.4
OPHN1O60890 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.55■□□□□ 0.4
OPHN1O60890 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.55■□□□□ 0.4
OPHN1O60890 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
OPHN1O60890 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
OPHN1O60890 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.55■□□□□ 0.4
OPHN1O60890 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OPHN1O60890 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
OPHN1O60890 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.54■□□□□ 0.4
OPHN1O60890 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.54■□□□□ 0.4
OPHN1O60890 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
OPHN1O60890 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.54■□□□□ 0.4
OPHN1O60890 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 KRT18P28-201ENST00000453838 1332 ntBASIC17.54■□□□□ 0.4
OPHN1O60890 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.54■□□□□ 0.4
OPHN1O60890 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
OPHN1O60890 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.54■□□□□ 0.4
OPHN1O60890 AC097637.2-201ENST00000624096 1997 ntBASIC17.54■□□□□ 0.4
OPHN1O60890 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.54■□□□□ 0.4
OPHN1O60890 AP006288.1-201ENST00000446065 395 ntBASIC17.54■□□□□ 0.4
OPHN1O60890 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.54■□□□□ 0.4
OPHN1O60890 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.54■□□□□ 0.4
OPHN1O60890 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.54■□□□□ 0.4
OPHN1O60890 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.54■□□□□ 0.4
OPHN1O60890 AL596442.2-201ENST00000610240 980 ntBASIC17.54■□□□□ 0.4
OPHN1O60890 AC005593.1-201ENST00000624894 515 ntBASIC17.54■□□□□ 0.4
OPHN1O60890 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 AC004817.3-201ENST00000602957 2129 ntBASIC17.54■□□□□ 0.4
OPHN1O60890 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
OPHN1O60890 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
OPHN1O60890 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
OPHN1O60890 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OPHN1O60890 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms