Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
HCN1O60741 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.74■□□□□ 0.11
HCN1O60741 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.74■□□□□ 0.11
HCN1O60741 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.74■□□□□ 0.11
HCN1O60741 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.74■□□□□ 0.11
HCN1O60741 MIR940-201ENST00000401276 94 ntBASIC15.74■□□□□ 0.11
HCN1O60741 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.74■□□□□ 0.11
HCN1O60741 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.74■□□□□ 0.11
HCN1O60741 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.74■□□□□ 0.11
HCN1O60741 GPALPP1-207ENST00000611650 899 ntBASIC15.74■□□□□ 0.11
HCN1O60741 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HCN1O60741 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HCN1O60741 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.74■□□□□ 0.11
HCN1O60741 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.74■□□□□ 0.11
HCN1O60741 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCN1O60741 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.74■□□□□ 0.11
HCN1O60741 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.74■□□□□ 0.11
HCN1O60741 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.73■□□□□ 0.11
HCN1O60741 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.73■□□□□ 0.11
HCN1O60741 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.73■□□□□ 0.11
HCN1O60741 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HCN1O60741 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HCN1O60741 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HCN1O60741 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
HCN1O60741 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.73■□□□□ 0.11
HCN1O60741 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.73■□□□□ 0.11
HCN1O60741 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.73■□□□□ 0.11
HCN1O60741 AC009947.1-201ENST00000444350 727 ntBASIC15.73■□□□□ 0.11
HCN1O60741 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.73■□□□□ 0.11
HCN1O60741 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
HCN1O60741 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.73■□□□□ 0.11
HCN1O60741 AC140113.2-201ENST00000604370 208 ntBASIC15.73■□□□□ 0.11
HCN1O60741 AL139424.1-201ENST00000607572 797 ntBASIC15.73■□□□□ 0.11
HCN1O60741 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
HCN1O60741 AC005915.1-201ENST00000624912 2018 ntBASIC15.73■□□□□ 0.11
HCN1O60741 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
HCN1O60741 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
HCN1O60741 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
HCN1O60741 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
HCN1O60741 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.73■□□□□ 0.11
HCN1O60741 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCN1O60741 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.72■□□□□ 0.11
HCN1O60741 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.72■□□□□ 0.11
HCN1O60741 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
HCN1O60741 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 PCDHA1-201ENST00000378133 2726 ntBASIC15.72■□□□□ 0.11
HCN1O60741 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
HCN1O60741 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HCN1O60741 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HCN1O60741 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms