Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
SLC28A2O43868 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC28A2O43868 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC28A2O43868 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC28A2O43868 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC28A2O43868 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC28A2O43868 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
SLC28A2O43868 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SLC28A2O43868 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SLC28A2O43868 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SLC28A2O43868 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC28A2O43868 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC28A2O43868 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SLC28A2O43868 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC28A2O43868 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SLC28A2O43868 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC28A2O43868 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SLC28A2O43868 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC28A2O43868 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC28A2O43868 SLC25A1P3-201ENST00000395415 828 ntBASIC16.2■□□□□ 0.18
SLC28A2O43868 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC28A2O43868 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC28A2O43868 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC28A2O43868 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC28A2O43868 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC28A2O43868 FAM86GP-201ENST00000448322 971 ntBASIC16.2■□□□□ 0.18
SLC28A2O43868 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 RNA5SP421-201ENST00000516864 134 ntBASIC16.2■□□□□ 0.18
SLC28A2O43868 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC28A2O43868 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC28A2O43868 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC28A2O43868 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC28A2O43868 AJ011932.1-201ENST00000621707 465 ntBASIC16.2■□□□□ 0.18
SLC28A2O43868 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC28A2O43868 Z92544.3-201ENST00000624747 417 ntBASIC16.2■□□□□ 0.18
SLC28A2O43868 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SLC28A2O43868 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC28A2O43868 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC28A2O43868 AL049757.1-201ENST00000616842 1596 ntBASIC16.2■□□□□ 0.18
SLC28A2O43868 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SLC28A2O43868 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC28A2O43868 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC28A2O43868 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC28A2O43868 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC28A2O43868 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC28A2O43868 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC28A2O43868 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC28A2O43868 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC28A2O43868 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC28A2O43868 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SLC28A2O43868 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC28A2O43868 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.19■□□□□ 0.18
SLC28A2O43868 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SLC28A2O43868 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 AC073621.1-201ENST00000392730 636 ntBASIC16.19■□□□□ 0.18
SLC28A2O43868 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.19■□□□□ 0.18
SLC28A2O43868 HLA-V-201ENST00000429037 534 ntBASIC16.19■□□□□ 0.18
SLC28A2O43868 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SLC28A2O43868 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.19■□□□□ 0.18
SLC28A2O43868 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC28A2O43868 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC28A2O43868 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SLC28A2O43868 AC004835.2-201ENST00000603762 682 ntBASIC16.19■□□□□ 0.18
SLC28A2O43868 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC28A2O43868 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SLC28A2O43868 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC28A2O43868 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC28A2O43868 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC28A2O43868 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms